Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0411 ATGCACAGAAAGCTCTTTCCTGCAACCACCGCAAATCAAACCCAAGAGTGTTCTGATTTTTGTGACCCAGCTTGCCCTTACAACTGCTACTCTTACCCAGGCCACTACTTGCCGCCGCCGCCCGTTTTATCTCCAAGTAATCAGATCACGGCCTACTTGGCCATCGTTGCTTCACTCTTCACTGTCATATTTGTTCTTGTTGGTTTCTACGTTCTCAAAGTGAAGTGGTACTCCGATTGGTGTGGACGGAGACGCAATGGATCCTTTACCACCCAACCAGACAGCCTCGAGGATGAGTTTATTGATGAGAATCAAGTTGATCACCCTCTCTGGTTGATCACCACCATTGGTTTACAACAGTCCATCATAAACTCCATTACGGTCTGTAAGTACAAAAAGGGCGAGGGATTGATCGAGGGAACTGAGTGTTCAGTGTGCCTGAATAAATTCCAGGAGGACGAAACCTTGAGACTCTTGCCGAAGTGCAACCACGCCTTCCACATCCTCTGCATCGACACGTGGTTGCGGTCTCATATCAGTTGCCCTCTTTGTCGTGCCGGCATTGTCCCTAACAACGCCAGTTCCGATGCAGCCATGTTAAACGTGAGTTCAGTGGAGGAAAACTCTAACACAGTGGTAAGAAATGAAGGCGAACAAGTTGAGCGGAATGGTGGGGAATTAATTACTGTGGCCTCCGAAAACGGAGAGGGAACAGGAGAAGCGGGGGAAGCCGAAGAGTTTTCGCATGAATCAGTGTCGAAGAATGAACAGACTTTAGATGAAATAGGAAAAATAACGAGTTATGTATCGATGGATTGTTGCGTTGATCATGTAAAGGAAGAGACTGAAGGGGACAGGGTGAATGTTCTGAAGAAAGGCGGTGAATATTCAACACTCTTTAAACCAGCGCGCGGCTCTTCAATTGCACGGTGTCTTCGCGTAACGCCTATTTCGATGAAGAGGTCAGCCTCCTGCAGCGGCAGGGTTGTATCGACGAGAGGCCATAAGAGTCTTAATTCAAGTCTTCACCGCTAG 1035 0.4792 MHRKLFPATTANQTQECSDFCDPACPYNCYSYPGHYLPPPPVLSPSNQITAYLAIVASLFTVIFVLVGFYVLKVKWYSDWCGRRRNGSFTTQPDSLEDEFIDENQVDHPLWLITTIGLQQSIINSITVCKYKKGEGLIEGTECSVCLNKFQEDETLRLLPKCNHAFHILCIDTWLRSHISCPLCRAGIVPNNASSDAAMLNVSSVEENSNTVVRNEGEQVERNGGELITVASENGEGTGEAGEAEEFSHESVSKNEQTLDEIGKITSYVSMDCCVDHVKEETEGDRVNVLKKGGEYSTLFKPARGSSIARCLRVTPISMKRSASCSGRVVSTRGHKSLNSSLHR 344
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0411 344 FunFam RING-H2 finger protein ATL54 118 191 - -
Lele02g0411 344 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 50 193 IPR044675 -
Lele02g0411 344 ProSiteProfiles Zinc finger RING-type profile. 143 185 IPR001841 -
Lele02g0411 344 Pfam Ring finger domain 142 185 IPR001841 -
Lele02g0411 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 193 IPR013083 -
Lele02g0411 344 SUPERFAMILY RING/U-box 136 191 - -
Lele02g0411 344 CDD mRING-H2-C3H2C2D_ZSWM2 142 185 - -
Lele02g0411 344 SMART ring_2 143 184 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele02g0411 Lele-ChrLele02 2386743 2387777 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0411 2 189 C3H Transcription Factor Family AT1G72220 49.083 4.74e-66 212