Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0386 ATGGGAAGATCTCCATGCTGTGATGAGAAGGGACTTAAGAAAGGACCTTGGACTCCCGAGGAAGACGAAAAGCTCGTTCTGTTCATTCAGAAACATGGCCATGGAAGTTGGAGAGCTCTCACCAAACTTGCTGGTCTTAACAGATGTGGAAAGAGCTGTAGGCTGAGGTGGACCAACTATTTAAGACCTGATATTAAGAGGGGCAAGTTTTCTCAAGAAGAGGAGCAAACTATTCTCCACCTCCATTCCATCCTTGGAAACAAATGGTCTGCAATTGCATCCCATCTTCCAGGCAGGACAGATAATGAGATTAAGAACTTCTGGAATACTCATTTAAAGAAGAAGCTGATTCAGATGGGCTTTGACCCAACGACTCATCAGCCAAGAACTGACCCCTTTTCAAGCTTGGCCTATCTGCTGGCTTTGGCCAACATGACTGGCCTAATGGATCATCAACCATCACTGGATGAACATGCCCTGAAATTACAAGTAGAGGCAGTTCAGTTGGCCAAGCTTGAATACCTTCATTATTTACTGCAACCCACAAGTTCCTTGACTACCGACTTCTATGACCAGAGAGCCAACATCACCAACATGGAAGCTCTCAATTTGCTAACTTCAATGTCTAATGTCAACGATAATCCAGTTATAAACTGCCCACAACTGGATAACGCATCCTTATTTTCTAATGCGATTGATGGCCCTCAACCACTCCACCAGCCAGACATGCTATCTCAAATTTCAGACCCACAAGTCTCTTTCAGTACTTGCCAACCAAGTTTGAATAATAGTGAGAAGAATCAAGTTACTAATAACTTTACAATGATTAGAGAAGGGGATAACATAGCCAATGACAATTCATGGATGATTCAGTCTCCTGCTGCATCGATTCATCCAACTGTGACGGCGGGGACCTCCTCAAACAGCAATCCTGGAGATGCCGGCAGCCGCACGTCCAGCTATGGAGGTGGAACCTCCTCTTATTGGCCTGAACTCTTTTTTGACCCAATTATGCCTAATGCATGA 1026 0.4454 MGRSPCCDEKGLKKGPWTPEEDEKLVLFIQKHGHGSWRALTKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMGFDPTTHQPRTDPFSSLAYLLALANMTGLMDHQPSLDEHALKLQVEAVQLAKLEYLHYLLQPTSSLTTDFYDQRANITNMEALNLLTSMSNVNDNPVINCPQLDNASLFSNAIDGPQPLHQPDMLSQISDPQVSFSTCQPSLNNSEKNQVTNNFTMIREGDNIANDNSWMIQSPAASIHPTVTAGTSSNSNPGDAGSRTSSYGGGTSSYWPELFFDPIMPNA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0386 341 Gene3D - 69 116 - -
Lele02g0386 341 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 265 - -
Lele02g0386 341 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele02g0386 341 FunFam Transcription factor MYB39 69 130 - -
Lele02g0386 341 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele02g0386 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele02g0386 341 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele02g0386 341 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele02g0386 341 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele02g0386 341 MobiDBLite consensus disorder prediction 299 322 - -
Lele02g0386 341 SMART sant 13 63 IPR001005 -
Lele02g0386 341 SMART sant 66 114 IPR001005 -
Lele02g0386 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele02g0386 341 FunFam MYB-related transcription factor 13 66 - -
Lele02g0386 341 Gene3D - 13 66 - -
Lele02g0386 341 CDD SANT 16 61 IPR001005 -
Lele02g0386 341 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0386 Lele-ChrLele02 2256795 2258035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0386 1 341 MYB Transcription Factor Family AT1G34670 53.495 5.44e-111 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele02g0386 Myb_DNA-binding 5.1e-16 CL0123