Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0369 ATGCAATACGAGTGCCTCTTTAATTCATCCTACACCTCATTTCATCTCCCTATTTTAGAGAGATCCATAACAACTACCTGTAAAAGCCTGTTGTGTTCAAAAGTTCGACAGAGTTCGAGAGCATTGACCTGGGCAAAGGATTTTAGGAAGGGTGGTGATTGTGATGAATTTTCCTTGTCCATGTCTCCGTTCTCTATTATGTCGTGTTCAACCAATTCCATGGCGCCTAATGAGCTGAAATTACGCTATCGAACTGGAACTTGGATCTCCAGGCACTTGTGGATATGCCACGAGTCATTCAAAGTTCGCAGTTCACTTGCAGATTCACGGAGCAGACGCGTAGTTTATCTACGGGAATATTTAATGTGGGATTCATCCAAGTCAACATCACTTAGTCCAGACATTAGGTCGCGACGGGCTCGCGAGGGGGCCGAGGGAAGGGAGAATGATCATGGTTCAGATTGCTTACTGCCCAATGACTCGAGACGGGTCGGCCCTCCCATTAGCCTTTGGGCTAGTAGCCCATTCAGTTTGGACCTGAAAATGGAATTGCTAGCCGCTTTTGACAGAATGCAGCTGTCAGCCATTATCCTTCCTTGCTTGCTTCTGCTCTCTGAATCTGTGGCCCCTGCCGATTTCACTCAGTCGCCGCCTTTTGCTTGTGACTGGTCCAATCCTGCTACCAGATCCTACCCGTTCTGCAATCCCAAGCTCAGCGTGTCTCGAAGATCCCAAGACCTGGTGTCCCGACTCTCATTGGACGAGAAGCTAGCTCAACTCGTGAACGACGCACCTTCTATTCCTCGACTCGGGATCCCTGCATACCAATGGTGGAATGAGGCTTTACACGGAGTCGCCAACGTCGGACGTGGCATCCGATTCAATGGCTCCATTTCTTCTGCTACTAGCTTCCCTCAAGTCATCCTCTCCGCCGCCACCTTCGACTCCCACCTCTGGTACAGAATCGGTCAGGCCATTGGAACGGAAGCGAGAGCAATCTATAATGCAGGACAAGCCACGGGCATGACATTTTGGGCTCCAAACATTAACATCTTCAGGGATCCGAGATGGGGGAGAGGGCAAGAGACGGCCGGCGAAGACCCGCAGGTTACTTCCAAGTACGCTGTGTCGTATGTGAGGGGGGTACAGGGCGATTCCTTCCAGGGAGGCAAACTCAGTGGTCATCTTCAAGCTTCCGCTTGTTGCAAGCATTTCACGGCCTACGATTTGGACAACTGGAAGGGTGTAAATCGCTTCGACTTCGATGCTCGCGTCACTTTGCAAGATTTAGCGGACACATATCAGCCTCCATTTCAGAGTTGCGTAGTGCAAGGACGAGCAAGTGGGATAATGTGCGCTTATAACCGAGTGAATGGGGTTCCAAACTGCGCAGATCACAATCTCCTAACTAAAACGGCCAGAAAACAGTGGGGTTTTCATGGGTATATCACTTCCGATTGTGGCGCAGTCTCACTCCTTCGTGATCATCAAGGATATGCTAGATCAGCGGAGGATGCTGTGGCCGATGTACTTCGGGCTGGAATGGACGTAGAGTGCGGTGATTACTTAACGAAGTATGCTAAATCAGCAGTGGTGCAGAAAAAATTACCAATATCTCAAGTAGATCGTGCCCTTCACAACCTGTTCTCAATCAGAATAAGGCTTGGTCTATTCGATGGGAATCCAGCCAAACTGCCCTTCGGCGCAATTGGTCCTAATCAAGTTTGTTCAAAAGATCACCAGTATTTGGCTCTTGAAGCTGCCAGAAATGGCATTGTCCTTTTGAAGAACTCTGCCAGACTTCTCCCGCTCCCTAAAACAAAACCCACAATTTCCCTTGCACTCATAGGTCCTAACGCCAATCCTTCCTCTTTAACTCTCCTTGGAAACTATGCGGGCCCTCCCTGTAAACTCGTGTCGCCATTCCAGGCCTTTCAGCACTACGTTAAGGACACCATTTATCACCCTGGTTGTGATGATGGAGCCAAGTGTTCTTCGGCTCAGATTGGCAAAGCCGTGGAAATCGCCACGAAGGTGGATTACGTGGTGCTGATGATGGGATTGGATCAAAGTCAAGAGAGAGAAGATCGTGATCGGGTTCACCTGGACTTGCCTGGCAAGCAGCTGGAACTCATACACAGCGTCGCTAAAGCTTCCAAGAGGCCAGTCATTTTGGTGATCTTTTCTGGAGGCCCTATTGATATTTCTTCGGCCAAGTATAACAACAAAGTTGGAGGCATCCTCTGGGCCGGCTATCCCGGAGAAGCTGGTGGAATCGCACTTGCTCAGATTATCTTTGGCGATCACAACCCAGGAGGAAGATTACCGGTGACCTGGTACCCAAAAGATTTCATAAGAGTGCCAATGACAGACATGAGGATGCGAGCTGATCCATCTTCTGGGTATCCCGGAAGGACTTACCGGTTTTACACGGGACCAAAGGTGTATGCGTTCGGCTATGGCCTGAGCTACTCTAAATATTCGCACGAGTTCGTCTCTGTCACGCGAAACAAGCTTCACTTGAATCAATCGTCGTCTTATTTGATAGTTGAGAATTCAGAAACCATTCGCATCAAATCAGTGTCAGAGATGGGTGTAAAATTGTGCGAAAGCATGTCGGTGTCGGTGACGGTGGGAGTTCAAAATGATGGAAGTATGGCGGGGAAGCATTCGGTGTTGCTATTTGCAAGGCATGCAAAACAGAGAAGTGGAAATGCGATCAAACAGTTGGTGGGATTTGAGAGTGTGATGTTGGAGGCAGGGGAAAGGGCAGAAGTGGGATTTGAGATACGCCCCTGTGAGCACCTTAGCAGAGCAAGCGAGGTTGGCTCCAAAGTCATTGAAGAAGGGCGCCACCTGTTGACTGTTGGGGATCAAGAGTATCTGATTGATATCATTTTCTGA 2904 0.4914 MQYECLFNSSYTSFHLPILERSITTTCKSLLCSKVRQSSRALTWAKDFRKGGDCDEFSLSMSPFSIMSCSTNSMAPNELKLRYRTGTWISRHLWICHESFKVRSSLADSRSRRVVYLREYLMWDSSKSTSLSPDIRSRRAREGAEGRENDHGSDCLLPNDSRRVGPPISLWASSPFSLDLKMELLAAFDRMQLSAIILPCLLLLSESVAPADFTQSPPFACDWSNPATRSYPFCNPKLSVSRRSQDLVSRLSLDEKLAQLVNDAPSIPRLGIPAYQWWNEALHGVANVGRGIRFNGSISSATSFPQVILSAATFDSHLWYRIGQAIGTEARAIYNAGQATGMTFWAPNINIFRDPRWGRGQETAGEDPQVTSKYAVSYVRGVQGDSFQGGKLSGHLQASACCKHFTAYDLDNWKGVNRFDFDARVTLQDLADTYQPPFQSCVVQGRASGIMCAYNRVNGVPNCADHNLLTKTARKQWGFHGYITSDCGAVSLLRDHQGYARSAEDAVADVLRAGMDVECGDYLTKYAKSAVVQKKLPISQVDRALHNLFSIRIRLGLFDGNPAKLPFGAIGPNQVCSKDHQYLALEAARNGIVLLKNSARLLPLPKTKPTISLALIGPNANPSSLTLLGNYAGPPCKLVSPFQAFQHYVKDTIYHPGCDDGAKCSSAQIGKAVEIATKVDYVVLMMGLDQSQEREDRDRVHLDLPGKQLELIHSVAKASKRPVILVIFSGGPIDISSAKYNNKVGGILWAGYPGEAGGIALAQIIFGDHNPGGRLPVTWYPKDFIRVPMTDMRMRADPSSGYPGRTYRFYTGPKVYAFGYGLSYSKYSHEFVSVTRNKLHLNQSSSYLIVENSETIRIKSVSEMGVKLCESMSVSVTVGVQNDGSMAGKHSVLLFARHAKQRSGNAIKQLVGFESVMLEAGERAEVGFEIRPCEHLSRASEVGSKVIEEGRHLLTVGDQEYLIDIIF 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0369 967 PRINTS Glycosyl hydrolase family 3 signature 304 323 IPR001764 GO:0004553|GO:0005975
Lele02g0369 967 PRINTS Glycosyl hydrolase family 3 signature 472 490 IPR001764 GO:0004553|GO:0005975
Lele02g0369 967 PRINTS Glycosyl hydrolase family 3 signature 398 414 IPR001764 GO:0004553|GO:0005975
Lele02g0369 967 SUPERFAMILY (Trans)glycosidases 231 590 IPR017853 -
Lele02g0369 967 FunFam probable beta-D-xylosidase 2 577 825 - -
Lele02g0369 967 Gene3D - 577 825 IPR036881 GO:0004553|GO:0005975
Lele02g0369 967 Gene3D Immunoglobulins 853 965 IPR013783 -
Lele02g0369 967 SMART Fn3_like_2 890 960 IPR026891 -
Lele02g0369 967 MobiDBLite consensus disorder prediction 127 160 - -
Lele02g0369 967 Pfam Glycosyl hydrolase family 3 C-terminal domain 592 824 IPR002772 GO:0004553|GO:0005975
Lele02g0369 967 Gene3D - 243 565 IPR036962 GO:0004553|GO:0005975
Lele02g0369 967 Pfam Fibronectin type III-like domain 891 959 IPR026891 -
Lele02g0369 967 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 592 827 IPR036881 GO:0004553|GO:0005975
Lele02g0369 967 MobiDBLite consensus disorder prediction 134 157 - -
Lele02g0369 967 PANTHER SUGAR HYDROLASE-RELATED 206 962 IPR044993 GO:0009044|GO:0045493
Lele02g0369 967 Pfam Glycosyl hydrolase family 3 N terminal domain 297 548 IPR001764 GO:0004553|GO:0005975
Lele02g0369 967 FunFam probable beta-D-xylosidase 7 243 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0369 Lele-ChrLele02 2143236 2150210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0369 217 960 Glycoside Hydrolase AT1G78060 65.596 0.0 1018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0369 02 2143236 2150210 Lele25g0342 25 2089314 2094486 CCT
Lele02g0369 02 2143236 2150210 Lele26g0360 26 2171766 2176224 CCT
Lele02g0369 02 2143236 2150210 Lele27g1739 27 22646434 22651326 CCT
Lele02g0369 02 2143236 2150210 Lele28g0358 28 2192375 2196859 CCT
Lele02g0369 02 2143236 2150210 Lele02g0369 02 2143236 2150210 ECH
Lele02g0369 02 2143236 2150210 Lele03g0380 03 2192833 2203776 hybridization
Lele02g0369 02 2143236 2150210 Lele04g0377 04 2228733 2239314 hybridization