Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0367 ATGGAGCCGCTGACTCCAAGAGGAGTTGAAGCCGACAAAATAGAAGAAGGGGTTGGTGAATGCCTGAATGGCGGTGGTAAGTATATGGTGAAGGAGTCGCGGAAGTCCGAGAAGCGAGTGTTGAGAATGACTGCTAAAGTCTGTCACCAGGCCATTGGGACTTTTCCGTCTGATTCGCTTCTTAGAAATTCTAACAATCGCCAGAATCTTCAGAAGAACTCCTTAAGATTGATAGCTAAGGATTTTAACAGCCGCAATAGCTTCTCAAGGAGAGCTGATCAGAGGAATTGTTTCATAATCCGATCCTCAGCTTCTCAAACATCCGTGGTTGATCCGTTGTTATCCCCTTCAAGAAGCAGCACCAGTGACAGTTCCAAGAAATCAAATGAAGCAGCGTTGATCCTTATTCGGCACGGTGAATCGTTATGGAATGAAAAGAATTTATTCACAGGCTGCGTAGATGTCCCACTAAGCAAGAAGGGCATAGATGAGGCGATTGAAGCTGGCAAAAGGATCAGTAGCATTCCTGTCGATGTCATATTTACATCTGCCCTGATTCGCGCACAAATGACAGCCATGCTTGCCATGACCCAGCACCGTCGAGGAAAGGTAACAGGGATGATAACCATCTTCACGTTTCGAAATCATGGAAGTCATTACTGGAGTAACTTAGGACTGGACGGTTCTAGGGAATTAGAAATTGCCAGGTTATGCTATAATATAGTTGTTGCTCATGATGTAAGCAGCAATACAATGATATCTAGTTTGCAGTTTACACCATTTAGAGAATCATATCCTTTGCTGTACTATACTATTCAACGCCTTTTTCTGACCTTCATTAACTATCCACCTTTATGCAGGTATGGAGAGCTACAGGGTCTTAATAAGCAGGAAACTGCTGACAGATATGGGAAAGACCAAGTCCACGAATGGCGCCGAAGTTATGATACACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGGGCAGTTGCTTATTTTAGAGAGCGGATTGAACCCCAGCTTTCATCTGGAAAAAATGTTTTGATTGCTGCTCATGGGAATTCATTGAGATCCATTATCATGTATCTTGACAAACTAACTTCCCAAGAGGTCATTAGTTTGGAACTATCCACTGGAATTCCCATGCTTTATATTTTCAAAGAAGGCAGATTTATTAGGAGGGGTAGTCCCATAGGACCAACTGAAGCTGGGGTTTATGCCTATACTAGGGGAATGCATTCTGCATTGTCTGCTGCATCACGTTAG 1275 0.4329 MEPLTPRGVEADKIEEGVGECLNGGGKYMVKESRKSEKRVLRMTAKVCHQAIGTFPSDSLLRNSNNRQNLQKNSLRLIAKDFNSRNSFSRRADQRNCFIIRSSASQTSVVDPLLSPSRSSTSDSSKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRGKVTGMITIFTFRNHGSHYWSNLGLDGSRELEIARLCYNIVVAHDVSSNTMISSLQFTPFRESYPLLYYTIQRLFLTFINYPPLCRYGELQGLNKQETADRYGKDQVHEWRRSYDTPPPNGESLEMCAERAVAYFRERIEPQLSSGKNVLIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPTEAGVYAYTRGMHSALSAASR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0367 424 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 130 401 IPR005952 GO:0004619|GO:0006096|GO:0016868
Lele02g0367 424 SUPERFAMILY Phosphoglycerate mutase-like 133 393 IPR029033 -
Lele02g0367 424 PANTHER PHOSPHOGLYCERATE MUTASE 121 416 IPR005952 GO:0004619|GO:0006096|GO:0016868
Lele02g0367 424 CDD HP_PGM_like 133 396 IPR013078 -
Lele02g0367 424 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 135 144 IPR001345 GO:0003824
Lele02g0367 424 Gene3D - 286 400 IPR029033 -
Lele02g0367 424 Gene3D - 116 224 IPR029033 -
Lele02g0367 424 SMART PGAM_5 132 362 IPR013078 -
Lele02g0367 424 Pfam Histidine phosphatase superfamily (branch 1) 133 199 IPR013078 -
Lele02g0367 424 Pfam Histidine phosphatase superfamily (branch 1) 287 380 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0367 Lele-ChrLele02 2131943 2136831 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0340 26 2031169 2032701 Lele02g0367 02 2131943 2136831 CCT
Lele27g1760 27 22768952 22771602 Lele02g0367 02 2131943 2136831 CCT
Lele02g0367 02 2131943 2136831 Lele02g0367 02 2131943 2136831 ECH
Lele02g0367 02 2131943 2136831 Lele03g0378 03 2181580 2184913 hybridization
Lele02g0367 02 2131943 2136831 Lele04g0375 04 2219180 2222284 hybridization