Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0354 ATGGAAAAGAAAGAGTTAGTGGAGGCAATAGAATCAAATTCTCGTGCTGTTGAAAAGCTGGAAGATGTTCCCACTGACCACAATGAAAAGGCCAAGCCGCCAGAAGAGGTAAAAAGTCAAAATATTGGCAGTAATGATCTCGCGTCAGACAATAGACAAGATGATATACCTGATAAGACAAATGAGAAGGCAGATGAGCATGAGAGTAATGTCATGAAGACAGAAACTGAAGATGAATCCTTCAATAATGTTGGACAAAATTCCTCCGATGATGTTGATGGCAGCAAAGAGTCCGAGTTTACCAGACAAGGAGGAATCGTAGATGTAATTTCTGGACAAAATGACTTGGCCAAAGATATGAGCGAGAGTGGGAATGTGGAATCCACACAAATGAATCATAAGATAGATGAAATTCCAAGGGAGGACAATAATCTAGAGCCCGTGTTTGACGGAACAGAGGTTTCAGGTATGGAAGCTAACAGAAGCACAGATAACAGTTCTTTAGACTTGAATGCTGATCCGTATACTCATGGTGTGGTTGAGAAAGCTGTGGCACTTAAAAAATTTGTTAGGGAGAGAAGTGTTATAGCAGTCTCTACTGTGCTACGTCGCCTTTCTGGAAAAGGTGATGAAGCTTCCATGAGCAATTCTGATGATGAAAGTAAGAATGCTTCTGAATCCTCAAATGTGGATTCTAGTGAGAAAAAATCTTGGAACCCCCTAAATTATATTAGGATGTCATTCGAAGCTGAGTCGGAAGGCAAAAATGAATGTAGGGATCCAATAACTGGAGGTCCTCAATATCCCATAGCCATGAAAGGAAAGATTATACTCTACACAAGACTAGGGTGCCAGGAATCTAAAAAAGTTAGGCTATTTTTGTATATGAAACGGCTTAGGTATGTTGAAATCAATATTGACGTGTACCCCAGTAGAAAGCAGGAGCTTGACAGGATTTCTGGATCTACTTCTATTCCCAAGGTATTTTTCAATGAAATACTTATTGGACGTTTGAATGAGCTAAAGGCCCTGGATGAATCTGGTAAGCTTGATGAGAAGATTGAATTTCTCATTACTGAAGCGCCGTCAATTGAAGCTCCGTTACCGCCTCTTTCTGGAGAGGATGATGAGTCTAGTAATGGAGCTCTCGATGAAATGGCTTTAATTGTCAGCAAAATGAAAGAATTTATTTTTGTGAAAGATCGATTTTACAAAATGCGGAGGTTCACAAACTGTTTTCTTGGCTCAGAAGCTGTGGACTTCTTATCAGAAGATCAATACTTGGAAAGACAGGAGGCTGTTGAGTTTGCACGAAATCTTGCTAGCAAATTCTTCTTCCAGCATGTTCTTGATGAGAATCTATTCGAGGATGGTAACCACTTGTACCGTTTTTTGGATGATGACCCGGTTGTGGCTTCTCAATGTCGCAATATTTCGAGGGGCATAACCACTGTGAAGCCAAAGTCTATAATAGAAATCGCATCAAGGCTGAGGTTTTTGTCTCATGCAATATTTGAAGCCTATGTTTCTGAAGATGGACATCATGTTAATTACAGAATTCTCCATGGGAGCGAGGAGTTTGCGAGGTATCTGAGAATAGTAGAGGAGCTCCAAAGAGTGGAAATATGGGATATGTCTAGAGAAGAGAAGCTAGCTTTCTTTATCAATCTCTATAATATGATGGCCATTCATGCAATCTTAGAATGGGGCCATCCAGCTGGGGCACTGGAAAGAAGAAAATTGTTTGGAGACTTCAAATATGTGATTGGTGGGTCCACTTACTCACTTTCAGCCATTCAAAATGGCATTTTAAGGGGAAACCAGCGGCCACCATACAATCTTATGAAGCCATTTGGTGCAAAAGATAAACGCGCGAGGGTGGCTCTTCCTTGCCCTGAGCCTCTTATTCATTTTGCTTTAGTATGCGGTACCAGATCTGGGCCTGCCCTTAAATGCTATTCTCCTCGAGATATTGACAAAGAATTAATGGACTCAGCTCGCAATTTCTTGAGAAGTGGAGGACTTCTCATTGATTTGAATACGAAGGTTGCATATGCTAGTAAGATCCTTAGGTGGTTTAGTATAGATTTTGGCAAGAACGATGCAGAGGTACTGAGGCATGTGTCAAACTACTTAGACCCAGCTGACGCAGCAGTATTGTTGGATCTACTTGCCACTTCTGAATTAAAGGTGATTCATGTCCCTTATGATTGGGGTTTAAACTACTAA 2229 0.4087 MEKKELVEAIESNSRAVEKLEDVPTDHNEKAKPPEEVKSQNIGSNDLASDNRQDDIPDKTNEKADEHESNVMKTETEDESFNNVGQNSSDDVDGSKESEFTRQGGIVDVISGQNDLAKDMSESGNVESTQMNHKIDEIPREDNNLEPVFDGTEVSGMEANRSTDNSSLDLNADPYTHGVVEKAVALKKFVRERSVIAVSTVLRRLSGKGDEASMSNSDDESKNASESSNVDSSEKKSWNPLNYIRMSFEAESEGKNECRDPITGGPQYPIAMKGKIILYTRLGCQESKKVRLFLYMKRLRYVEINIDVYPSRKQELDRISGSTSIPKVFFNEILIGRLNELKALDESGKLDEKIEFLITEAPSIEAPLPPLSGEDDESSNGALDEMALIVSKMKEFIFVKDRFYKMRRFTNCFLGSEAVDFLSEDQYLERQEAVEFARNLASKFFFQHVLDENLFEDGNHLYRFLDDDPVVASQCRNISRGITTVKPKSIIEIASRLRFLSHAIFEAYVSEDGHHVNYRILHGSEEFARYLRIVEELQRVEIWDMSREEKLAFFINLYNMMAIHAILEWGHPAGALERRKLFGDFKYVIGGSTYSLSAIQNGILRGNQRPPYNLMKPFGAKDKRARVALPCPEPLIHFALVCGTRSGPALKCYSPRDIDKELMDSARNFLRSGGLLIDLNTKVAYASKILRWFSIDFGKNDAEVLRHVSNYLDPADAAVLLDLLATSELKVIHVPYDWGLNY 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0354 742 MobiDBLite consensus disorder prediction 116 132 - -
Lele02g0354 742 SUPERFAMILY Thioredoxin-like 273 355 IPR036249 -
Lele02g0354 742 Pfam Protein of unknown function, DUF547 544 670 IPR006869 -
Lele02g0354 742 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 25 741 - -
Lele02g0354 742 Pfam Glutaredoxin 276 332 IPR002109 -
Lele02g0354 742 Coils Coil 3 23 - -
Lele02g0354 742 ProSiteProfiles DEP domain profile. 393 466 IPR000591 GO:0035556
Lele02g0354 742 MobiDBLite consensus disorder prediction 76 91 - -
Lele02g0354 742 SMART DEP_3 392 466 IPR000591 GO:0035556
Lele02g0354 742 MobiDBLite consensus disorder prediction 218 236 - -
Lele02g0354 742 MobiDBLite consensus disorder prediction 1 145 - -
Lele02g0354 742 Gene3D - 385 520 IPR036388 -
Lele02g0354 742 ProSiteProfiles Glutaredoxin domain profile. 264 361 - -
Lele02g0354 742 MobiDBLite consensus disorder prediction 207 236 - -
Lele02g0354 742 CDD DEP 389 463 - -
Lele02g0354 742 SUPERFAMILY "Winged helix" DNA-binding domain 395 474 IPR036390 -
Lele02g0354 742 MobiDBLite consensus disorder prediction 1 36 - -
Lele02g0354 742 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 399 464 IPR000591 GO:0035556
Lele02g0354 742 MobiDBLite consensus disorder prediction 51 75 - -
Lele02g0354 742 Gene3D Glutaredoxin 271 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0354 Lele-ChrLele02 2048478 2052118 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0319 26 1906138 1916298 Lele02g0354 02 2048478 2052118 CCT
Lele28g0320 28 1930775 1939915 Lele02g0354 02 2048478 2052118 CCT
Lele02g0354 02 2048478 2052118 Lele02g0354 02 2048478 2052118 ECH
Lele02g0354 02 2048478 2052118 Lele03g0366 03 2105659 2109345 hybridization
Lele02g0354 02 2048478 2052118 Lele04g0361 04 2143867 2147477 hybridization