Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0352 ATGAGTTCTACATCAACCCAACTTGTCATCTCAAAAAGGATGGGCATATACGAGCCATTCCAGCAAGTCAGCATGTGGGAGGACAACTTTAAAGTTGAAAATAGCCTAAATTCAGGTCCTTCCCAGATATTCATGGTGAACCCTACTACACAGCCCAAGGCTGAATATATTCCTCATGAATCCATGGGAGCCTCAGGAGATGATCAAGAGACCAACACTGCTGTTAGCAAGGTGCTTAAACGCCTGGCACAAAATCGCGAAGCAGCTCGAAAAAGTCGTCAAAGGAAAAAGGCTTATGTCCAACAATTAGAAACGAGCCGTCTGAAGCTCATGCAACTGGAGCTAGAGATTGAGAAAGCGAAAAAGCAGGGTATGTATATGGGCGGAGCATTAGATGCTACTTACACAGGATCACCTGGAACAATCAACCCAGGGATTGCAACTTTTGAGATGGAATATAGTCATTGGGTTGAAGAGCAACACAGACAGAATGCAGAACTTAGAAACGTATTGCAAACACAGTCATCTGATGTGCAGCTTCATCTGCTGGTTGAGAGTGGCTTGAATCATTACTCAAATCTTTTCAGGATGAAAGCTGACGCTGCAAAAGCTGATGTCTTCTACTTAATCTCTGGAGTGTGGAAGGCATCTGTTGAACGCCTCTTCCTCTGGATAGGTGGATCCCGCCCGTCTCAGCTTCTTAATATCATCGTGCCACAGGTGGAGGATTTGACGGATCAACAGAAAGCGAGTTGCACCAAACTCCGGCAATCTTCTCAGCAAGCTGAAGATGCTCTTTCACAAGGACTGGATAAACTACAGCAGAATCTGGTCTTCAACATGGGAGCTAATGGATTGGACATGGGAAGCTTCGGGTTTCAGATGACTTCTGGCATGGAGACAATTGAAGCACTAGAGGGTTTTGTGAGCCAGGCAGACCACCTTCGACAACAAACGTTGCAGCATATGTCTCGGATCCTGACGCCCCGACAAGCAGCTCAAGGGTTGCTGATCTTAGGCGAATACTTTCATCGTCTTCGTGCTCTGAGTTCTCTTTGGTCAGCTCGTCCATGCGATCCTGCATTCCAAGTTTTAGAGTGA 1101 0.4623 MSSTSTQLVISKRMGIYEPFQQVSMWEDNFKVENSLNSGPSQIFMVNPTTQPKAEYIPHESMGASGDDQETNTAVSKVLKRLAQNREAARKSRQRKKAYVQQLETSRLKLMQLELEIEKAKKQGMYMGGALDATYTGSPGTINPGIATFEMEYSHWVEEQHRQNAELRNVLQTQSSDVQLHLLVESGLNHYSNLFRMKADAAKADVFYLISGVWKASVERLFLWIGGSRPSQLLNIIVPQVEDLTDQQKASCTKLRQSSQQAEDALSQGLDKLQQNLVFNMGANGLDMGSFGFQMTSGMETIEALEGFVSQADHLRQQTLQHMSRILTPRQAAQGLLILGEYFHRLRALSSLWSARPCDPAFQVLE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0352 366 ProSiteProfiles DOG1 domain profile. 146 356 IPR025422 GO:0006351|GO:0043565
Lele02g0352 366 Pfam Seed dormancy control 165 238 IPR025422 GO:0006351|GO:0043565
Lele02g0352 366 SMART brlzneu 73 133 IPR004827 GO:0003700|GO:0006355
Lele02g0352 366 Pfam bZIP transcription factor 77 109 IPR004827 GO:0003700|GO:0006355
Lele02g0352 366 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 80 95 IPR004827 GO:0003700|GO:0006355
Lele02g0352 366 Gene3D - 76 126 - -
Lele02g0352 366 SUPERFAMILY Leucine zipper domain 77 110 IPR046347 GO:0003700|GO:0006355
Lele02g0352 366 FunFam BZIP family transcription factor 76 125 - -
Lele02g0352 366 Coils Coil 96 123 - -
Lele02g0352 366 PANTHER TRANSCRIPTION FACTOR TGA9 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0352 Lele-ChrLele02 2022538 2024812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0352 2 360 Calmodulin-binding Proteins AT1G77920 55.348 2.08e-136 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele02g0352 DOG1 1.6e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0352 02 2022538 2024812 Lele02g0352 02 2022538 2024812 ECH
Lele02g0352 02 2022538 2024812 Lele03g0363 03 2087623 2089875 hybridization
Lele02g0352 02 2022538 2024812 Lele04g0359 04 2121719 2123990 hybridization