Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0345 ATGCGTCCTTCAAAGTCACGTCAAGTTCATCCCAACCCGGTTCAGGGGAGCCGTCTAGACCCAAAAATCTGGCGAGCATGCGCCGGTGGATGTTTTCGAATCCCTCCTCTTCAGTCTAGGGTTTATTACTTCCCTCAGGGCCATATCGAGCATGCCTCGTCGGCTCCTCTATACCTTAACCCTCTAATCTTCTACAGGCCCCTGATTCTCTGTCGCGTCTCCGCTGTTGAATTTCTTGCTGACCCTGCCGCCGATGAGGTATTTGCCAAGATTTCGCTCCTTCCATTGAGTGATGGCAACTCTGATCACTTTGCCGATTCCGTGGAAGCGCCGGACGATGACAAGATTGTGTCGTTTGCGAAGGTTCTGACGCCTTCTGACGCGAACAATGGCGGTGGATTCTCTGTTCCTAGGTACTGTGCTGACTCCATCTTTCCACCTCTGAACTTCCAGGTCGACCGACCCACCCAGACATTGTACGTGACGGATGTTCACGGTAACGTCTGGGAGTTTCGCCACATTTATCGGGGCACACCAAAGCGGCACTTGCTCACTACTGGGTGGAGTAAGTTTGTCAATAGCAAGAAGTTGGTTGCTGGTGACTCGGTGGTTTTCATGAAGAATTCTGGCGGGATGATGTTCGTCGGTATTCGCAGAGCTTTGCGATTCACTAAATTAACTACCGTCGATTGCTCCATATTGTCTTTCCAGCTTGGTGGGGTGAGAAATAAGCCGGAGGGGGAGCAGCAGCAAGAGGGCTATTTAGGTAGGAAAGAAGGATTTTCAAGGAACGGAAAGGGGAAATTGTCGGCTAAGGAGGTTGCTGATGCTGCAGATTTGGCAGCGCAAAGCATGCCATTTGAGGTTGTTTATTATCCAAGGGCGGGCTGGTCGGACTTTGTGGTGAAGGCGGAAGTTGTGGAGAAAGCTTTGAATGTCGCATGGACTACCGGAATGAGAATTAAAATGGCAATGGAGACTGAGGATTCGTCCAGGATCACATGGTTTCAGGGGACGGTATCTTCTGCATCTGCTCCTGATAATGGGCTTTGGCGGGGTTCTCCATGGCGTATGCTTCAGGTTATGTGGGATGAACCTGACGTCTTGCGGAATGCAAAGCGGGTGAGCCCCTGGGAGGTTGAGCTTGTTTCCTCTGTCCTTCCCCCTAATGCAGTACTCCCTCCTGCAAAAAGGTTTAGAGCTGCTCAGTATTGTGCGGTGGCAACCGATAGGGAGGGAGACCCCTTCTTTACTATGACAGGTTTGACTAATTCAACAAGAGGGCACTTGAACCAATCATTGTTGAATTACAATACTGTTGTTCCTGCTGGCATGCAGGGAGCCAGGCAAGATCTATCTTCTGTATCAAGTCTCTCCAACTTTGGAATTGGTAATTCTCATCTGTATATTGGCAATACATTTGGAAACACGGTACCCAAGATGAAAACTTTTATGTCAACAGAGCCAAATATTGACAGTTCTCAGTCTAATAGCTTGTCACCAGAAAGCCAGAGTAGTTTGCAGGGCTCTGGCACAGAATTTGCTGGGACACGAGGCTGCAACTTAACAAAACAGGGTGTAAGTTCAATTCAGCTATTCGGTAAGCTCATTCAATTGGAACAGCCCGTTGAAAATGATGAGGGTAGTAATGGCTGCAATGAGACTGAAGGCGTTGACTAA 1680 0.4893 MRPSKSRQVHPNPVQGSRLDPKIWRACAGGCFRIPPLQSRVYYFPQGHIEHASSAPLYLNPLIFYRPLILCRVSAVEFLADPAADEVFAKISLLPLSDGNSDHFADSVEAPDDDKIVSFAKVLTPSDANNGGGFSVPRYCADSIFPPLNFQVDRPTQTLYVTDVHGNVWEFRHIYRGTPKRHLLTTGWSKFVNSKKLVAGDSVVFMKNSGGMMFVGIRRALRFTKLTTVDCSILSFQLGGVRNKPEGEQQQEGYLGRKEGFSRNGKGKLSAKEVADAADLAAQSMPFEVVYYPRAGWSDFVVKAEVVEKALNVAWTTGMRIKMAMETEDSSRITWFQGTVSSASAPDNGLWRGSPWRMLQVMWDEPDVLRNAKRVSPWEVELVSSVLPPNAVLPPAKRFRAAQYCAVATDREGDPFFTMTGLTNSTRGHLNQSLLNYNTVVPAGMQGARQDLSSVSSLSNFGIGNSHLYIGNTFGNTVPKMKTFMSTEPNIDSSQSNSLSPESQSSLQGSGTEFAGTRGCNLTKQGVSSIQLFGKLIQLEQPVENDEGSNGCNETEGVD 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0345 559 MobiDBLite consensus disorder prediction 486 513 - -
Lele02g0345 559 FunFam Auxin response factor 117 221 - -
Lele02g0345 559 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 18 542 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele02g0345 559 SUPERFAMILY DNA-binding pseudobarrel domain 105 227 IPR015300 -
Lele02g0345 559 Pfam Auxin response factor 277 360 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele02g0345 559 ProSiteProfiles B3 DNA-binding domain profile. 119 221 IPR003340 GO:0003677
Lele02g0345 559 Gene3D - 116 221 IPR015300 -
Lele02g0345 559 SMART B3_2 119 221 IPR003340 GO:0003677
Lele02g0345 559 Gene3D - 315 387 - -
Lele02g0345 559 CDD B3_DNA 118 219 IPR003340 GO:0003677
Lele02g0345 559 Pfam B3 DNA binding domain 119 220 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0345 Lele-ChrLele02 1990406 1993505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0345 14 557 B3 DNA Binding Superfamily AT1G77850 47.283 2.01e-168 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele02g0345 B3 5.5e-23 CL0405