Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0338 ATGGACAACCAGAAGATCCCAAGAAAACCGAAGCTCGATCGTCGTAATGCCGCTAAATACTTTGAGTACGATGCTGCTTCATCTTCATCGTCGCTGGACGACTCCTCTGGTTCTCTATATACTCGAGCAATGGAGTTTTATAACCGAACCAGCTTCCGAATCGAGGGTGTTGAGGGCGAGTTTGATCTTATATGCAGGAGTTTGGGGCTAGCCGGACCAGAAGACTTCGCTATCCCGGCGGCGGCGTGGGAGGCTATGAAGATTAGGTCGTCTTCGGATATTCTTCCAAGGTTGAAGTTGAAAGATTTGGAAAGTAGGGAGAAGGAGGAGCCGAAAGATAAAGGGGCTAATCAATTAGTGCGTGACTCAGGTGACAAATGTGAAGAAAGGATTACGATTAGAGATGTGAATGAATCAGCTAAGGACGAGCCTGCTGAGACAAGTGGAAGCGGATGTATCAAGGGTCTCCGTCCGCCGATGATTAGGCCACCACCAGGGATGAGGCTTCCAGTTATTGATAACATGTGTTCTACCTGGGATATTCTGAGAGATTTTGCTCCTCAAGATGGATTCTTTTTTGCTGTGAAAGAAGTCTCACTGCTCGATCAAGGGAGTCAGGGACAGCAGAGTGTCTATCAACTGGAGCAGGAGATTGCTCTTTTGAGGCAGTTTGAACATGAGAACATTGTTCAATACTATGGCACAGAAATGGATGAATCGAAGCTGTACATCTTTCTTGAGCTTGTTACTAAAGGTTCCCTTGCAAGCCTCTATAGGAGGTACAACCTTCGAGACTCTCAAGTGTCTGCCTACACAAGGCAGATTCTGCATGGTTTGAAGTATCTTCATGATCAAAATGTGATTCACAGGAAACATTTCACTTTTGCCTGCTTTCTTAATAGCAAGGATATTAAATGTGCAAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTAGCGGATTTTGGATTGGCAAAGGCAACCAAATTCAACGATGTTAAATCATGCAAGGGGACAGTATTTTGGATGGCGCCTGAGGTTGTAAAAGGTAAGAATCGAGGTTATGGGCTTCCAGCTGACTTGTGGAGTCTTGGTTGCACCGTATTGGAGATGTTAACCGGCCAAATTCCATACTCTCATCTGGAGGGGCTACTGCATTTGGTAGAACAGTGGCTTCATTGTTCTAGATATGTCACTAACACCTTAATTGGAAAAGGTGAGCGCCCGCCTGTTCCTGATTCTCTTTCAAAAGATGCAAGGGATTTTATACTGCAGTGTCTTCAAGTCAATCCAGACGAGCGTCCCACTGCTACTAAGCTGTTAAACCATCCATTTGTCCAAAGGCCACTATACATTTCGTCTGGCTCTGGCCCTGCATCCCCTTATATTCCTGGCAGAAGGAATTAA 1407 0.4527 MDNQKIPRKPKLDRRNAAKYFEYDAASSSSSLDDSSGSLYTRAMEFYNRTSFRIEGVEGEFDLICRSLGLAGPEDFAIPAAAWEAMKIRSSSDILPRLKLKDLESREKEEPKDKGANQLVRDSGDKCEERITIRDVNESAKDEPAETSGSGCIKGLRPPMIRPPPGMRLPVIDNMCSTWDILRDFAPQDGFFFAVKEVSLLDQGSQGQQSVYQLEQEIALLRQFEHENIVQYYGTEMDESKLYIFLELVTKGSLASLYRRYNLRDSQVSAYTRQILHGLKYLHDQNVIHRKHFTFACFLNSKDIKCANILVDASGSVKLADFGLAKATKFNDVKSCKGTVFWMAPEVVKGKNRGYGLPADLWSLGCTVLEMLTGQIPYSHLEGLLHLVEQWLHCSRYVTNTLIGKGERPPVPDSLSKDARDFILQCLQVNPDERPTATKLLNHPFVQRPLYISSGSGPASPYIPGRRN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0338 468 Gene3D Transferase(Phosphotransferase) domain 1 183 455 - -
Lele02g0338 468 FunFam Mitogen-activated protein kinase 1, putative, expressed 176 457 - -
Lele02g0338 468 SMART serkin_6 179 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g0338 468 MobiDBLite consensus disorder prediction 139 159 - -
Lele02g0338 468 Pfam Protein kinase domain 190 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g0338 468 ProSiteProfiles Protein kinase domain profile. 142 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g0338 468 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 188 461 - -
Lele02g0338 468 SUPERFAMILY Protein kinase-like (PK-like) 188 450 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0338 Lele-ChrLele02 1930713 1936536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0338 189 450 MAP Kinase Kinase Kinase AT4G08500 66.160 5.44e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele02g0338 Pkinase 8.1e-58 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0338 02 1930713 1936536 Lele02g0338 02 1930713 1936536 ECH
Lele02g0338 02 1930713 1936536 Lele03g0351 03 1989201 1995193 hybridization
Lele02g0338 02 1930713 1936536 Lele04g0347 04 2041742 2047635 hybridization