Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0332 ATGACACTTGCGAGCTTGAACCCCCAACCTTGCAAGTCCAAGAGCCTAAGCACTTGGTCTTGTTATAAACACCCGAGTGAGCAGTGTTGTGAAATAATTCCAAAAGCAAAGGGGCCACTTGCATCTTTTCCTAGGATGAGCAAACCCAGAACCCAAAGGAAAGACTTCAAACATGTCAACCGAAACCAGAATCAACAACCCCAGAAAACACAGAAACAAGCCTCTTGGGCAGCCATAAGAGGCCTATTGCCTTGTAGAACTGTTCAAATTCAGCAGCCGCCGCAGCTGGAAGTGAAACAACCAAAGCAGAAACAAGAGCAGAGGAAGCTACAAGAAGAAGAAGAAGCAGTCCCAGAAGAAAGCAGAAAGAAATGCAAGAAAATGAGATGTTCTGGTTCACTCTGTAACAACGCCAAGATCGTGGCAAGGCCTGAAACAGTGACTCCTGACACCAACAAGGTCAAAAGGGCGTCGCTTGCTGTATGTAACACGGCCAACAATGACGCTTCTCATTCTAACAGATCCTCGAAAGCTCCTCTGCATGAACTGAACGGTGTGGTTGCATCTGCCTCTTCTTCTAACTCTCTCTCTGTATCTTCAAACTCTTCTGTGAATGGATCTTTTAGGGGAATGCCATTCAGGAGGTTCTCTGGTTGCTATGAGTGTCGAATAGTGGTTGACCCTCTGCTTCCTTTCACCAGAGACCCTTCTCTCAGGAGTAGCATTTACCCTTGCCCTCACTGTGGTGAGATTTTCATGAAACCTGAAAATTTAGAGCTTCATCAGGCTGTTAAACATGCAGTATCTGAACTGGGTCCAGAAGATACGAGCAAGAACATAGTGGAGATTATATTCCACTCAAGCTGGCTAAAGAAACAATCTCCAGTTTGCAAAATAGACCGCATCCTTAAAGTCCACAACACTCAGAGGACAATTACCAAATTCGAAGAGTACAGAGAGTGCATCAAAGCCAAAGCCATGAAGCTTCCAAAGAAGCACCCTCGTTGCATAGCAGATGGAAACGAGCTACTGAGGTTCCATTGCACGACCTGTTTATGCTCACTGGGCCTAAAAGGCTCCACTAACCTCTGTAGCTCAATACCACAGTGCAGCGTGTGTGGCATAATCAAGAATGGCTTCAAGGTTGTCTCCGCCGGTGGAAAAGAGATACTGACGACGGCGACGAGTGGTAAAGCACACGACAGAGCCGAGGTTTCAGATGATGAGAATAATGAGAAGAGAGCAATGCTGGTATGCAGGGTGATTGCAGGGAGAGTGAAGAAGAATATAGAAGGAGGAGGAATAATGAGCACTGAAGAGTATGATTTTTTTGCAGGAGAAGTTGGGGCTTATTCCAATTTGGAAGAGTTGTATGTATCCAATCCTAGAGCTATTTTCCCCTGCTTCGTTGTTTTCTACTCTGCTTTTTGA 1431 0.4556 MTLASLNPQPCKSKSLSTWSCYKHPSEQCCEIIPKAKGPLASFPRMSKPRTQRKDFKHVNRNQNQQPQKTQKQASWAAIRGLLPCRTVQIQQPPQLEVKQPKQKQEQRKLQEEEEAVPEESRKKCKKMRCSGSLCNNAKIVARPETVTPDTNKVKRASLAVCNTANNDASHSNRSSKAPLHELNGVVASASSSNSLSVSSNSSVNGSFRGMPFRRFSGCYECRIVVDPLLPFTRDPSLRSSIYPCPHCGEIFMKPENLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQRTITKFEEYRECIKAKAMKLPKKHPRCIADGNELLRFHCTTCLCSLGLKGSTNLCSSIPQCSVCGIIKNGFKVVSAGGKEILTTATSGKAHDRAEVSDDENNEKRAMLVCRVIAGRVKKNIEGGGIMSTEEYDFFAGEVGAYSNLEELYVSNPRAIFPCFVVFYSAF 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0332 476 SMART c2h2final6 243 266 IPR013087 -
Lele02g0332 476 MobiDBLite consensus disorder prediction 101 121 - -
Lele02g0332 476 MobiDBLite consensus disorder prediction 40 75 - -
Lele02g0332 476 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 128 473 - -
Lele02g0332 476 ProSitePatterns Zinc finger C2H2 type domain signature. 245 266 IPR013087 -
Lele02g0332 476 ProSiteProfiles Zinc finger C2H2 type domain profile. 243 271 IPR013087 -
Lele02g0332 476 Coils Coil 103 123 - -
Lele02g0332 476 MobiDBLite consensus disorder prediction 61 75 - -
Lele02g0332 476 MobiDBLite consensus disorder prediction 93 121 - -
Lele02g0332 476 SUPERFAMILY ADP-ribosylation 268 474 - -
Lele02g0332 476 Gene3D - 267 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0332 Lele-ChrLele02 1876852 1878400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0332 208 476 C2H2 Transcription Factor Family AT1G75710 52.685 3.13e-97 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele02g0332 None None None