Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0319 ATGTCCCTGAGCCCTCCTCGCCAAAGGACGAATGGCGAACCCAGGACGAACCTCTTCTATTGCTACCAGTGCAACCGAGTGGTCCGTGTTCCCTCCCCAGATTTATCCGACATTACCTGTCCACTTTGTTCTGGCCAGATCCTCTGTGAAATCAACGTCTCAAGGCCTAGACTGGTCTTGGACTTTACGGACCACGATCCATCACCTGAAGCCCGCTTGCTAGAAGCCCTCTCTCTGTTGCTTGACCCGCCAATCAGGCAGTTTGATGGCCGTCTCCACGATCCCCAAGCTCGACCTCCACGCTTCCGTTGGATTCAGGGGCGACGGCCATCACGCCCACGAGAAGGCATACCCCATGCCTTCTCCGATGGTGAAATTCCCGTCCGCCGCGTACCGCGTCGACGACATCGTCGGGCTGCTCAGGGAGCTGGGGATTCCGACGCAGATGTTCCAGTCGCAGAACCTGAAATCCTTCCTCGGCCTCGGACTTGGCTAATTCTTCCACCTATAGATCCGTCTGACCCTTTGGAATCGATTCCGCGACGACAAAACCCTATACCGCGCGGTGTTGACCACCCCAGAGACTACTACTTTGGTCCTGGTCTGGGGGAACTGATTGACCAGTTGACGGAAAATGACAGGCCAGGGGCACAGCCGGCGCCGGAGAGGACTATCGATGCGATTCCGAGTGTGAAAATCTCGGAGGGCCATCTGAAGGAGAACTCATACTGCCCGGTTTGCCAGGAAGAATTTGAACTGGGAGGGGATGCGAGGGAATTGCCATGCAAGCACATATACCATTCAGATTGCATTGTTCCTTGGCTAAGGCTTCACAATTCCTGCCCTGTTTGCCGGCTTGAGGTGCCTGTGCCAGAGGCTTCGGACTCCGGTGAACCCAGTGGCAGAGAAGGCAGGCTGCGAAGTTGCTGGAGATGGAGTCAGATTCAGCTGGCTTCTTTGTGGCCTTTCCAGGGGAGGCATCGACGGATTCGTCCAGAAGGAGGGAATAATGAGCGAGTGCAGGGCGGATCCCATGCTGTATTCTTTAGTTCACTGCAGATAGTGACACTGATTTGCATGGGCTTACACTTGAAGTTCACTCTGCCACCCTATCAGAAAACAGGGGTCCCAACTTCATTACCTTTAGTAATAAGATATTCTCTTGCAGTTACAAAAGTAGATCCAAATACAGAACGAAAGTGGACAACAACCCAATATGGAATTCACTAA 1230 0.535 MSLSPPRQRTNGEPRTNLFYCYQCNRVVRVPSPDLSDITCPLCSGQILCEINVSRPRLVLDFTDHDPSPEARLLEALSLLLDPPIRQFDGRLHDPQARPPRFRWIQGRRPSRPREGIPHAFSDGEIPVRRVPRRRHRRAAQGAGDSDADVPVAEPEILPRPRTWLILPPIDPSDPLESIPRRQNPIPRGVDHPRDYYFGPGLGELIDQLTENDRPGAQPAPERTIDAIPSVKISEGHLKENSYCPVCQEEFELGGDARELPCKHIYHSDCIVPWLRLHNSCPVCRLEVPVPEASDSGEPSGREGRLRSCWRWSQIQLASLWPFQGRHRRIRPEGGNNERVQGGSHAVFFSSLQIVTLICMGLHLKFTLPPYQKTGVPTSLPLVIRYSLAVTKVDPNTERKWTTTQYGIH 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0319 409 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 177 289 - -
Lele02g0319 409 FunFam E3 ubiquitin-protein ligase RING1-like 208 291 - -
Lele02g0319 409 Pfam Ring finger domain 243 285 IPR001841 -
Lele02g0319 409 SMART ring_2 244 284 IPR001841 -
Lele02g0319 409 SUPERFAMILY RING/U-box 224 291 - -
Lele02g0319 409 ProSiteProfiles Zinc finger RING-type profile. 244 285 IPR001841 -
Lele02g0319 409 CDD RING-H2_RNF126_like 244 285 - -
Lele02g0319 409 Pfam zinc-ribbon 18 51 IPR039525 GO:0061630
Lele02g0319 409 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 207 291 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0319 Lele-ChrLele02 1798872 1800407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0319 216 324 C3H Transcription Factor Family AT1G68180 37.931 5.13e-22 92.4