Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0294 ATGGCAGGTTTCAGCGGTGACGAAACTGCTCCATTCTTCGGCTTCCTTGGAGCCGCTGCTGCCCTTGTCTTCTCCTGTAACTCTCTTTTCCTCCCTTTTCGTCGTCCACCCATTTGCTCGAAACTTCTCTGTAAATGTATGGGAGCTGCTTACGGAACGGCAAAGAGTGGAGTAGGCGTGGCCTCCATGGGAGTTATGAGGCCAGAGTTAGTCATGAAATCCATTGTCCCAGTGGTCATGGCTGGAGTGCTGGGTATTTATGGATTAATCATAGCTGTTATTATTAGTACAGGAATTAACCCGAAAGCAAAATCTTACTATCTCTTCGATGGGTACGCCCACTTATCGTCCGGCCTTGCCTGTGGCCTTGCCGGACTTTCTGCCGGAATGGCAATTGGAATTGTTGGTGATGCTGGAGTTCGTCTTGGTCCTCCTGGACCAAGAAATAGAATACAGGGCAAACGCGCAGCAGCCAAAGCTGTTCGTGGGAATGATTCTGATCCTGATCTTTGCCGAAGCCCTTGCTCTCTACGGCCTCATCGTGGGCATTATTCTCTCATCCCGTGCAGGCCAATCCCGTGCTGA 585 0.506 MAGFSGDETAPFFGFLGAAAALVFSCNSLFLPFRRPPICSKLLCKCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRLGPPGPRNRIQGKRAAAKAVRGNDSDPDLCRSPCSLRPHRGHYSLIPCRPIPC 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0294 194 FunFam V-type proton ATPase proteolipid subunit 33 148 - -
Lele02g0294 194 SUPERFAMILY F1F0 ATP synthase subunit C 106 143 IPR035921 -
Lele02g0294 194 PRINTS Vacuolar ATP synthase 16kDa subunit signature 49 73 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lele02g0294 194 PRINTS Vacuolar ATP synthase 16kDa subunit signature 75 99 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lele02g0294 194 PRINTS Vacuolar ATP synthase 16kDa subunit signature 126 152 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lele02g0294 194 Gene3D - 10 150 IPR035921 -
Lele02g0294 194 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 4 141 - -
Lele02g0294 194 CDD ATP-synt_Vo_c_ATP6C_rpt1 12 99 - -
Lele02g0294 194 Pfam ATP synthase subunit C 116 142 IPR002379 GO:0015078|GO:0033177|GO:1902600
Lele02g0294 194 Pfam ATP synthase subunit C 45 95 IPR002379 GO:0015078|GO:0033177|GO:1902600
Lele02g0294 194 TIGRFAM V_ATP_synt_C: V-type ATPase, C subunit 40 140 IPR011555 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0294 Lele-ChrLele02 1675543 1677650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0294 2 152 Primary Pumps ATPases(2) AT1G75630 80.132 3.71e-75 223