Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0280 ATGTCTGCCCAGAATAGGCGTCCATCGTTTTCCTCCTCGACGACGTCGTCTTTGGCAAAGCGGCATGCATCGTCGTCGGAGAATGTGGGGAAGGCTATGGCAGCCCCTTCACACTTGGCCAAGAAGCGAGCGCCTCTCAGTAACCTGACCAATCAAAAGAATGCTTCCCGTAGTGCTTTGCGAAAGTCACTGCCACCATCTACTCTGGTACCCTGCACGACTAAAATTACTCAGACAAAGAAGAAATTCCCTGCTTGCACCACAAGCTCAGCCATTTCCGGGAATAAAATGCCTACTTCGTCAAATGCTAAATCGACTGCAGTTGTTTTCCCCAAGGCCACTTCTTTCCCACAAAGGCATGAAAGTGCTTCTGCTACTGTTGCTCTTCCTTGCAGTATGGATACTTCTATCAAATCAGATAGGATGTCAGTTTCTTTGGACGAGACGATGTCTACCTGCGACTCTTTCAAGAGTCACGAAATTGAATACATTGACAACAGCGATGTCTCAGCTCTTGATTCTATTGACAGAAAGACATTCAGCAATCTGAACATCTCAGATAATACGGAGGCACCAGTTAATGCTTGTAGTGGAGGCATACTTGTTGACTTGGAAAGAGATGGCAAATTTGTCAATATCGATGACAACTACTTGGATCCCCAGCTTTGTGCACCCTATGCATGTGATATCTACAAGCATTTGCGTGCATCTGAGGCAAAGAAAAGGCCTTCCACAGATTTCATGGAGAGAATTCAGAAGGACATAAATTCCAACATGCGTGCTATATTAGTTGACTGGCTTGTGGAGGTGGCTGAAGAGTATAGGCTTGTGCCTGTTACATTGTATTTGACAGTCAACTACTTAGATCGGTATCTTTCGGGGAATGTAATGAGTAGGCAAAAGTTACAATTACTTGGTGTTGCCTGCATGATGATTGCCGCTAAATATGAGGAGATTTGCGCGCCTCAGGTGGAGGAATATTGTTATATAACTGATAACACATACTTCAAAGAAGAGGTTTTGCAAATGGAATCTGCGGTCTTAAATTATCTGAAGTTTGAAATGACAGCTCCGACAATAAAATGTTTCTTAAGACGATTTGTTCGTGCAGCTCAAGGAGTCAACGAGGTTGCATCATTACAATTAGAGTGCTTGACCAACTATATTGCTGAGTTGTCTTTACTGGAGTATACAATGCTCTGTTATGCCCCATCACTTATAGCTGCTTCTGCAATCTTCCTGGCGAAACTCATCCTTTTCCCTTCAAAAAAACCGTGGAATTCCACATTGCAGCATTACACACTCTACAAGGCTTCTGATTTGCGTAACTGTGTGAAGGATCTCCATCGTCTATGTTATAACAGCCATAGTTCTGGCTTACCTGCAATCCGGGAGAAATACAGTCAACACAAGTACAAATATGTGGCAAAGAAGTCGTGTCCTCCGTCAATCCCTCCAGAACTTTTCCAAATTTACCTGATGAGTTTCCTGAGGCCTTCAGCATTGTACGCATTTCTTATTTCATGTCCTTCCTTCAGATGGATGCCCTGTCAGAGTTGGGGTTTTCTCCGATGGCCCGGTCTCGATGGCTTCTTGAGACTTTTGGTGATGTTCCTTCTCTGGTCTATGTTCTTGGAGCTTCGCTTCATACCTTCATCTTCTATGCACCCCACTCTTACAGTTGGTGATCGAATTATTGTCGAGAAGGCTTCGTATTACATCAGGAGTCCTGCCCTACAGGATATTGTATTATTCCAAGATCCGACACAGTTATCTGAAGACGAAGCAACCGATATATTTATCAAGAGAGTTGTTGCAAAAGCAGGAGATTTTGTTCAGGTTCGTGGTGGGTCTCTCTACATCAACGGTGTTGCTCAGAAGGAAGATTATGTAGCAGCACAACCAACATACATGACAAACTTAACTTATGTACCAAACGGTCATGTTTATGTGTTGGGTGACAATCGAAACAAGAGCTATGATTCGCATGTTTGGGGACCATTGCCTGTCAAAAACATAGTGGGAAGATATGTCGTGTGTTGTCACAGACCCACAAACACATGA 2064 0.4365 MSAQNRRPSFSSSTTSSLAKRHASSSENVGKAMAAPSHLAKKRAPLSNLTNQKNASRSALRKSLPPSTLVPCTTKITQTKKKFPACTTSSAISGNKMPTSSNAKSTAVVFPKATSFPQRHESASATVALPCSMDTSIKSDRMSVSLDETMSTCDSFKSHEIEYIDNSDVSALDSIDRKTFSNLNISDNTEAPVNACSGGILVDLERDGKFVNIDDNYLDPQLCAPYACDIYKHLRASEAKKRPSTDFMERIQKDINSNMRAILVDWLVEVAEEYRLVPVTLYLTVNYLDRYLSGNVMSRQKLQLLGVACMMIAAKYEEICAPQVEEYCYITDNTYFKEEVLQMESAVLNYLKFEMTAPTIKCFLRRFVRAAQGVNEVASLQLECLTNYIAELSLLEYTMLCYAPSLIAASAIFLAKLILFPSKKPWNSTLQHYTLYKASDLRNCVKDLHRLCYNSHSSGLPAIREKYSQHKYKYVAKKSCPPSIPPELFQIYLMSFLRPSALYAFLISCPSFRWMPCQSWGFLRWPGLDGFLRLLVMFLLWSMFLELRFIPSSSMHPTLTVGDRIIVEKASYYIRSPALQDIVLFQDPTQLSEDEATDIFIKRVVAKAGDFVQVRGGSLYINGVAQKEDYVAAQPTYMTNLTYVPNGHVYVLGDNRNKSYDSHVWGPLPVKNIVGRYVVCCHRPTNT 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0280 687 Pfam Cyclin, N-terminal domain 229 355 IPR006671 -
Lele02g0280 687 Pfam Cyclin, C-terminal domain 358 479 IPR004367 -
Lele02g0280 687 PANTHER CYCLINS 160 473 IPR039361 -
Lele02g0280 687 SUPERFAMILY Cyclin-like 358 483 IPR036915 -
Lele02g0280 687 TIGRFAM sigpep_I_bact: signal peptidase I 533 680 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele02g0280 687 MobiDBLite consensus disorder prediction 1 24 - -
Lele02g0280 687 Gene3D - 229 477 - -
Lele02g0280 687 CDD CYCLIN 356 449 IPR013763 -
Lele02g0280 687 PRINTS Bacterial leader peptidase 1 (S26A) family signature 543 559 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele02g0280 687 PRINTS Bacterial leader peptidase 1 (S26A) family signature 644 663 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele02g0280 687 PRINTS Bacterial leader peptidase 1 (S26A) family signature 600 612 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele02g0280 687 SUPERFAMILY LexA/Signal peptidase 543 679 IPR036286 -
Lele02g0280 687 ProSitePatterns Signal peptidases I signature 3. 649 662 IPR019758 GO:0004252|GO:0016020
Lele02g0280 687 MobiDBLite consensus disorder prediction 44 71 - -
Lele02g0280 687 Gene3D - 243 356 - -
Lele02g0280 687 Gene3D Umud Fragment, subunit A 552 684 - -
Lele02g0280 687 SMART Cyclin_C_2 358 481 IPR004367 -
Lele02g0280 687 FunFam Cyclin A1 345 477 - -
Lele02g0280 687 FunFam Mitotic cyclin 6 243 343 - -
Lele02g0280 687 FunFam Peptidase/ serine-type peptidase 552 681 - -
Lele02g0280 687 CDD CYCLIN 259 348 IPR013763 -
Lele02g0280 687 CDD S26_SPase_I 546 676 IPR019533 GO:0004252|GO:0006465
Lele02g0280 687 SMART cyclin_7 362 450 IPR013763 -
Lele02g0280 687 SMART cyclin_7 265 349 IPR013763 -
Lele02g0280 687 MobiDBLite consensus disorder prediction 1 71 - -
Lele02g0280 687 SUPERFAMILY Cyclin-like 219 355 IPR036915 -
Lele02g0280 687 Pfam Signal peptidase, peptidase S26 531 679 IPR019533 GO:0004252|GO:0006465
Lele02g0280 687 ProSitePatterns Cyclins signature. 260 291 IPR006671 -
Lele02g0280 687 ProSitePatterns Signal peptidases I serine active site. 552 559 IPR019756 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0280 Lele-ChrLele02 1599871 1607278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0280 4 489 Core Cell Cycle Gene Families AT1G44110 64.417 0.0 578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0280 02 1599871 1607278 Lele25g0240 25 1435822 1438012 CCT
Lele02g0280 02 1599871 1607278 Lele26g0249 26 1483917 1489295 CCT
Lele02g0280 02 1599871 1607278 Lele27g1847 27 23290079 23295848 CCT
Lele02g0280 02 1599871 1607278 Lele28g0262 28 1546283 1551643 CCT
Lele02g0280 02 1599871 1607278 Lele02g0280 02 1599871 1607278 ECH
Lele02g0280 02 1599871 1607278 Lele03g0295 03 1656507 1659172 hybridization
Lele02g0280 02 1599871 1607278 Lele04g0287 04 1687862 1705313 hybridization