LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele02g0276	ATGGCGAAGCCATTCATTTTCCTTTCCCTCCCCATCTCCCTCGTCTTCACCGTCTCGCTTGCTGCTTCACCTCCTCCTCCTCCTTCATGTCCGTTCGATCTTAACTACGTCCTAACTGCCCCCTGGGACACTTCAACTTGCCTTAAAGTTGACCCAGAAAATGGAACCCAACACTGTTGTCAAGCACTTCTCAGCCTCTTCGGGGTCGGACTTGCTCAGCACCTCAAAGACACGTCCATCTTCGAACTTCCCGATGTTAAATCTTCCTCTTCTTGCCTCTCCGATTTCAGTACCAAGCTCGCAGCTTTATCAACCCCCGCCGATATGGTCTCCACTTGCTTCCAGAACTCTACTCAGTTCGTTGCCAATACCTCGAGCTGTGCAGGAATTAAAACCGCCCAAGATTTTAATTCGAAGGTTGGCATGATGACACCTTTAGATACATCCTGTAATGGTGACCTCATGGGGCTAACTCGATGTGGTATTTGCCGGGATGCTGGCTTCAAGGTCACTTCCCAATTGGCTGCTCTGGATCCAAAAAACTCCACTAAGTGTTTCTACTTCACAGTCTTATATGCTGCTGCTTTTGTGAACCAGTACGGTCCTAAAGATGTTAGAACAGCTAGTTGCATACTTGGTATGCCTCTGTCTACTGCTGGAACAAAAGGGTCGTCAAACAGAGACCGTACTCTGAAGTTGAGTTTTGGGTTATTGGGTGCAGTTGTCGGTGTTCTTCTTGCTTTTCTTCTGATTGCTGTCTACAGGAAGTGGGATAGGAGAAGGAGGGAAAATATTCATCACAGAGCAGTTGTGAGCAGCGTGAGGGCCAATGTTTTGCCTTACACCGGGGCGAAATGGTTTCATTTGTCAGAGCTTGAAAAAGCCACTGATAAATTTTCCCAGAGGAATCTGATCGGTCAAGGATCTGATGGGATTGTGTACAAAGGAACTCTTCAGGATGGCGCTTTGGTTGCAGTGAAAGAGATTTTTGATCTGGAAACCAAAGGGGATGACGAGTTCTGCTATGAAGTGGAGATCATCAGCAAAATAAAGCACAGGAATCTTGTTGCTCTCCGAGGTTGTTGTGTTACAAGTGATAACACCAAAGGTAAAAGAAGGTTTCTGGTTTATGATTACATGCCGAATGGCAGCCTCGGTTACCAATTATCTCTTTCTGGAGCTAACAGGCTAACATGGCCACGGAGAAAGAACATAATTCTCGACGTGGCTAAAGGGCTCGCTTATCTGCATTACGAAATCAAACCCCCAATTTATCACCGTGACATAAAGGCCACGAACATACTTCTAGACTCAACAATGAAAGCTAAAGTTGCAGATTTTGGATTAGCCAAGCAAGGAAACGAAGGCCAGTCTCATCTTACCACAAGGGTTGCTGGCACTTATGGTTATTTAGCACCAGAGTATGCTCTGTATGGGCAACTAACAGAGAAAAGTGATGTTTATAGCTTTGGGATTCTGATTCTTGAAATCATGAGCGGAAGAAAGGTGCTTGACACTTCAAATTCATCGATTCTCTTGATCACAGACTGGGCTTGGACGCATGCGAAATCAGGAAAGATAGAGGAAATATTGGAGGAGTCAATAAGAGAAGGAGGGCCGAAGAGGATAATGGAGAGGTTTGTTCTTGTGGGGATTCTCTGTGCCCATGTGATGGTGGCTCTGAGGCCCACTATTTCTGAAGCACTCAAGATGCTAGAAGGTGACATTGACATTCCCAATTTACCAGACAGACCAGTGCCCCTGGGTCACGAGTCCTTTCAATCTTCTCTTTTGTATGGCCTTCCAAGAAGTGGAATATCTACACCGTTCGGTTCATCTATTCAAGCGTGA	1851	0.4581	MAKPFIFLSLPISLVFTVSLAASPPPPPSCPFDLNYVLTAPWDTSTCLKVDPENGTQHCCQALLSLFGVGLAQHLKDTSIFELPDVKSSSSCLSDFSTKLAALSTPADMVSTCFQNSTQFVANTSSCAGIKTAQDFNSKVGMMTPLDTSCNGDLMGLTRCGICRDAGFKVTSQLAALDPKNSTKCFYFTVLYAAAFVNQYGPKDVRTASCILGMPLSTAGTKGSSNRDRTLKLSFGLLGAVVGVLLAFLLIAVYRKWDRRRRENIHHRAVVSSVRANVLPYTGAKWFHLSELEKATDKFSQRNLIGQGSDGIVYKGTLQDGALVAVKEIFDLETKGDDEFCYEVEIISKIKHRNLVALRGCCVTSDNTKGKRRFLVYDYMPNGSLGYQLSLSGANRLTWPRRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSTMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGILILEIMSGRKVLDTSNSSILLITDWAWTHAKSGKIEEILEESIREGGPKRIMERFVLVGILCAHVMVALRPTISEALKMLEGDIDIPNLPDRPVPLGHESFQSSLLYGLPRSGISTPFGSSIQA	616

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele02g0276	616	Gene3D	Transferase(Phosphotransferase) domain 1	380	578	-	-
	Lele02g0276	616	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	424	436	IPR008271	GO:0004672\|GO:0006468
	Lele02g0276	616	FunFam	Receptor-like serine/threonine-protein kinase At4g25390	264	379	-	-
	Lele02g0276	616	Gene3D	Phosphorylase Kinase; domain 1	260	379	-	-
	Lele02g0276	616	Pfam	SPARK	27	185	IPR043891	-
	Lele02g0276	616	CDD	STKc_IRAK	305	574	-	-
	Lele02g0276	616	Pfam	Protein kinase domain	300	569	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele02g0276	616	SMART	serkin_6	299	572	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele02g0276	616	FunFam	probable LRR receptor-like serine/threonine-protein kinase RKF3	380	580	-	-
	Lele02g0276	616	ProSiteProfiles	Protein kinase domain profile.	299	559	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele02g0276	616	SUPERFAMILY	Protein kinase-like (PK-like)	283	589	IPR011009	-
	Lele02g0276	616	PANTHER	OS01G0750732 PROTEIN	37	580	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele02g0276	Lele-ChrLele02	1575355	1577205	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele02g0276	26	594	Receptor kinase-like Gene Family	AT1G11050	53.596	0.0	589

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RKF3	Lele02g0276		Pkinase	1.8e-43	CL0016