Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele02g0252 | ATGTTAGGCCGTGTAGTGCACGTTGGGTTTTGGTCAACAGTCAACGGCAGTTGGTCCCTGATCCATTCATTCAGTATTCGTATGATAAAGGAGTTGCGTAGAATGTGGGGAGAGGACCTGGTCAAAGTCGCTAACTTTTGTTGTATTTGGGAAGCTTCACCTTCACTCTCTGGAATGAATGCGTCATGCAATGCAGGCAAAGTCTCCGTCAACTTGGGACTCAAGGACACAGCCACAGCTACAATCTTTGCTTTCCCCATTTCTAGCTCCCAAAACAAGTTCGTAAGTGTAGGTTGTGACAGTTATGGCTACATAAAAGCCTTTGACGCTGAGCAGAATTATTATACCACTGGCTGCTTATCGCAATGTAAAAAACTTCCCCCACCAGCACAGAGTACTGGTGAAACTTGTTCCGGAATTGGGTGTTGCCAAGTCGATATTCCTCCTCGAATGAGGAATATCACTTTAGAATCACATAGCTTCAACAGTCATCAAAATGTGCGGGCTTTCAACAACTGCACCTATGCTTTTGTTGCCAAACAAGGCTCCTTTAATTTCTCTCCTCATTATCTTGAGCGTCTCCCCTTTAACGAGTCCAAGGTCGTGATAGATTGGTCTATTGTAGATTATGATACTTTTCAAGAAGCTCCCGCTCGGAGCACACCAAATCCTGTATGCAATCACAACGCCTTCTCTCAGAACTTCGACGGTGGATTCGGATACAGATGCTTTTGCAAGTCGGGGTTTCTTGGAAATCCATACCTTCCTGATGGATGTCAGGATGTTAATGAGTGCCACACACACAATAACTGTGATGCGCATGCGCAGTGCAACAATTTCGACGGTGGCTACAATTGTTCTTGTGCACCTGGTTATCAAGGCGATGGCTACGTTAATGGAACCCGCTGCACTTTGGACACACCTCTTCAGTCTAATCCTCATTTGCTTTCTCTTATAATAGCACTAGGAGTTTGTGTAACCTTGTTAGTTGGCTTCACCCTAGTCTCCTCATTATGCTGGGCACACAAGCAAAGAACTCTGAAACAAATTAGGCAAAGAAATTTCGAGCAAAATGGAGGAAACATGCTGCTGCAAAGACTTTCACAACAAGAAGGATACGCCGACAGAACCAAAATATTTACACAAGTGGAGCTTCAGAATGCCACAAACAACTTCGACGAAGATAGAATCCTTGGCCGTGGGGGACAAGGCACAGTTTACAAGGGTATATTACCCGACAACGCAGTGGTTGCCATTAAGAAGTCTAGAGTAGGAGGGGATCCCAGGCAGATTAAGGATTTTATCAATGAAGTGGTCGTGCTTTCCCAAATCAACCATCGGAATGTGGTCAAACTTTTGGGGTGTTGTCTTGAAACCGAAGTTCCTCTGTTAGTTTACGAGTTTGTGGACAATGGCACCCTTCTTGACCACATTGACCTATCAAAGAATGAACGCTCTATTTCATGGGAAACCCGATTAAGGATAGCAGCAGAAACTGCTGGGGCCCTACTTACCGGAAATAAAGCAGTTGAATACAATAGACTGGAACAGCGAAATTTGGCAATGTACTTTGTGTCTTCAATAAAAGAAGACCGTTTATGGGAAATTGTTGATAAGCAATTGTTAGATCAGGAGAAGAATGCTGAACAGTTGAAGGAAGTTGCTTTTCTGGCAAGGAGGTGTGTGAGAGTGAACGGAGAGGAAAGACCGACTATGAAGGAAGTAGCGATGGAATTGGAGGGTTTGATTGCAATGGAAAGGCATACTCGGGTGAAGGGTGGAGATACCATGGCAGAAGAAACTGAATGCTTAATTGTTCATGTGGCTGATGAATATGGGGATACCAGTTCTAGCAATGCATCTCGATATGATACCATACGAAAGCAGGTAGCATTTGAGATTGCAGATGGGCGTTGA | 1917 | 0.4429 | MLGRVVHVGFWSTVNGSWSLIHSFSIRMIKELRRMWGEDLVKVANFCCIWEASPSLSGMNASCNAGKVSVNLGLKDTATATIFAFPISSSQNKFVSVGCDSYGYIKAFDAEQNYYTTGCLSQCKKLPPPAQSTGETCSGIGCCQVDIPPRMRNITLESHSFNSHQNVRAFNNCTYAFVAKQGSFNFSPHYLERLPFNESKVVIDWSIVDYDTFQEAPARSTPNPVCNHNAFSQNFDGGFGYRCFCKSGFLGNPYLPDGCQDVNECHTHNNCDAHAQCNNFDGGYNCSCAPGYQGDGYVNGTRCTLDTPLQSNPHLLSLIIALGVCVTLLVGFTLVSSLCWAHKQRTLKQIRQRNFEQNGGNMLLQRLSQQEGYADRTKIFTQVELQNATNNFDEDRILGRGGQGTVYKGILPDNAVVAIKKSRVGGDPRQIKDFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVDNGTLLDHIDLSKNERSISWETRLRIAAETAGALLTGNKAVEYNRLEQRNLAMYFVSSIKEDRLWEIVDKQLLDQEKNAEQLKEVAFLARRCVRVNGEERPTMKEVAMELEGLIAMERHTRVKGGDTMAEETECLIVHVADEYGDTSSSNASRYDTIRKQVAFEIADGR | 638 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele02g0252 | 638 | SMART | egf_5 | 264 | 304 | IPR000742 | - | |
Lele02g0252 | 638 | Pfam | Protein tyrosine and serine/threonine kinase | 395 | 502 | IPR001245 | GO:0004672|GO:0006468 | |
Lele02g0252 | 638 | Gene3D | Laminin | 215 | 300 | - | - | |
Lele02g0252 | 638 | SMART | egfca_6 | 261 | 304 | IPR001881 | GO:0005509 | |
Lele02g0252 | 638 | Gene3D | Transferase(Phosphotransferase) domain 1 | 374 | 503 | - | - | |
Lele02g0252 | 638 | Gene3D | Transferase(Phosphotransferase) domain 1 | 504 | 602 | - | - | |
Lele02g0252 | 638 | SUPERFAMILY | EGF/Laminin | 260 | 296 | - | - | |
Lele02g0252 | 638 | ProSitePatterns | Calcium-binding EGF-like domain signature. | 261 | 286 | IPR018097 | GO:0005509 | |
Lele02g0252 | 638 | FunFam | Wall-associated receptor kinase 2 | 362 | 468 | - | - | |
Lele02g0252 | 638 | ProSiteProfiles | Protein kinase domain profile. | 392 | 638 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele02g0252 | 638 | ProSitePatterns | Aspartic acid and asparagine hydroxylation site. | 277 | 288 | IPR000152 | - | |
Lele02g0252 | 638 | SUPERFAMILY | Protein kinase-like (PK-like) | 378 | 503 | IPR011009 | - | |
Lele02g0252 | 638 | Pfam | Calcium-binding EGF domain | 261 | 296 | IPR001881 | GO:0005509 | |
Lele02g0252 | 638 | ProSiteProfiles | EGF-like domain profile. | 261 | 304 | IPR000742 | - | |
Lele02g0252 | 638 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 503 | 582 | IPR045274 | GO:0007166 | |
Lele02g0252 | 638 | CDD | EGF_CA | 261 | 295 | - | - | |
Lele02g0252 | 638 | FunFam | Fibrillin 2 | 256 | 299 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele02g0252 | Lele-ChrLele02 | 1430067 | 1433336 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele02g0252 | 503 | 638 | Receptor kinase-like Gene Family | AT1G21230 | 41.304 | 1.21e-19 | 91.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Lele02g0252 | PK_Tyr_Ser-Thr | 2e-16 | CL0016 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele02g0252 | 02 | 1430067 | 1433336 | Lele03g0271 | 03 | 1498041 | 1500851 | hybridization |