Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0240 ATGTACATGACAGATTCTTGCTCCAGTGAGAGTTATGACAAGAACTTCCATGATTCACCAACAGAAGAACTGATAGAACCATCTAGTTCCGGGGTCTCAATCAATTCATTTCGCCCGGACGATGCTTCTCCTTACCAGCCTAGAGCCAGTTCAGGAGCTGCCATGGTTGCTAATAACCCATTTGATACTTCTTTCATGTCCACCAGGCGTCATGGTGATGTCTATTATCAATCCAATTTTAGATCAGATTTCTCAGAAAATGAAAGCCTGGATGCACTTGACTTCAATGGTCAAATGAGATTAAAACTGCAAGAATTAGAGAGGGCACTGCTTAATGATGAAGAAGACATATTTGAGAATGCTCAAAGCATGGAATTTGACCCAGCTGAGTGGGCTGACCCCATTCAGAACGTGCAGCTCCATGACTCACCAAAGGAGTCTTCATCCTCAGATTATAATCTAAGCAGCATCAGTAGCAACAAAGAAGTATCACATATCTCTCGTTTGAGCCCCAGGCAAATGCTTCTTGAATGTGCAAGTGTACTTTCAGAAGGAAATTTAAAGGAGGCGTCGGATATGATAAATAATCTCCGGCAGATGGTATCAATTCAGGGAGATCCTCCCCAAAGAATTGCAGCCTATATGGTTGAAGGACTTGCAGCTCGCTTGGCTGAGTCTGGAAAGGGTATTTACAAAGCTCTGAAATGCAAGGAGCCTCCTTCTTCAGATCGTCTGGCAGCAATGCAGATATTGTTTGAAGGGTGCCCATGCTTTAAATTTGGATTCATTGCTGCAAATGGTGCAATCACAGAGGCAGTGAAAGATGAAACCCAGGTGCACATAGTAGATTTTGACATCAACCAAGGAAGCCAATACATAACTCTACTACAAACACTCGCTTCAAGGCCAGGCAAGCCACCCCACGTGAGGTTGACCGGAGTTGATGATCCAGAATCTATACAACGATCTGTTGGAGGCCTGAAGATCATAGGACAGAGACTTGAGAAGCTAGCAGAAGCACTGGAGTTGCCGTTCGAGTTTCGAGCGGTGCCGTCGAGGACATCACTCGTCACCCCTTCAATGCTCAAATGTCGGACTGGTGAAGCACTTGTGGTGAACTTTGCATTTCAGCTGCACCACATGCCGGATGAGAGTGTTTCCACAGTGAACGAGAGAGACCAACTCCTCCGCATGGTTAAGAGCCTAAAGCCACAACTTGTAACAATTGTGGAACAAGATGTGAACACTAACACAACCCCTTTCTTCCCAAGATTCGTAGAAGCGTACAATTATTACTCTGCTGTTTTCGAGTCGCTTGATGTGACTCTTTCGAGGGAGAGTCAGGACAGGATGAATGTTGAAAGGCAATGCTTGGCAAGGGACATCGTCAACATTGTTGCATGTGATGGTGAGGATCGGATTGAAAGGTACGAAGTTGCCGGGAAATGGAGGGCGAGAATGGCCATGGCTGGTTTCACTTCATCTCCACTGAGCAATCACGTGACTGAGTCGATTCGGAAGCTCATCGGGCAGTATAGTGAGAGGTACAAGATGAAGGAGCAAATAGGTGCACTCCATTTTGGGTGGGAAGACAAGAACTTGATTGTAGCTTCGGCGTGGAGGTGA 1626 0.4588 MYMTDSCSSESYDKNFHDSPTEELIEPSSSGVSINSFRPDDASPYQPRASSGAAMVANNPFDTSFMSTRRHGDVYYQSNFRSDFSENESLDALDFNGQMRLKLQELERALLNDEEDIFENAQSMEFDPAEWADPIQNVQLHDSPKESSSSDYNLSSISSNKEVSHISRLSPRQMLLECASVLSEGNLKEASDMINNLRQMVSIQGDPPQRIAAYMVEGLAARLAESGKGIYKALKCKEPPSSDRLAAMQILFEGCPCFKFGFIAANGAITEAVKDETQVHIVDFDINQGSQYITLLQTLASRPGKPPHVRLTGVDDPESIQRSVGGLKIIGQRLEKLAEALELPFEFRAVPSRTSLVTPSMLKCRTGEALVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLKPQLVTIVEQDVNTNTTPFFPRFVEAYNYYSAVFESLDVTLSRESQDRMNVERQCLARDIVNIVACDGEDRIERYEVAGKWRARMAMAGFTSSPLSNHVTESIRKLIGQYSERYKMKEQIGALHFGWEDKNLIVASAWR 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0240 541 ProSiteProfiles GRAS family profile. 162 541 IPR005202 -
Lele02g0240 541 MobiDBLite consensus disorder prediction 1 51 - -
Lele02g0240 541 MobiDBLite consensus disorder prediction 22 40 - -
Lele02g0240 541 Coils Coil 96 116 - -
Lele02g0240 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 145 536 IPR005202 -
Lele02g0240 541 Pfam GRAS domain family 172 541 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0240 Lele-ChrLele02 1361568 1363193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0240 5 541 GRAS Transcription Factor Family AT1G21450 63.904 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele02g0240 GRAS 3.3e-134 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0215 25 1275162 1276901 Lele02g0240 02 1361568 1363193 CCT
Lele02g0240 02 1361568 1363193 Lele02g0240 02 1361568 1363193 ECH
Lele02g0240 02 1361568 1363193 Lele03g0255 03 1388441 1391637 hybridization
Lele02g0240 02 1361568 1363193 Lele04g0246 04 1462350 1463975 hybridization