Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0232 ATGAAGTGGTGGTCCACCCTATTGTCCGTCTTCCGCACATCGTCTGAAGAATATTCAACCATTTTCACTGTTGTCGTCGTCCTTCATACTCAGTATCCAGTAGCTATGTCTACCACGGCTGGTCAGATTATCAAGTGCAAAGCTGCGGTGGCTTGGGAAGCAGGGAAGCCACTGGTGATGGAAGAGATAGAGGTGGCGCCTCCCCAGGCTGGAGAAGTGCGTCTGAAAATCCTCTTTACCTCTCTTTGCCATACTGACGTTTACTTCTGGGAAGCAAAGGGTCAAACTCCAGTATTCCCTCGTATATTAGGTCACGAAGCCGGAGGGATTGTGGAGAGCATAGGGGAGGGAGTGAATCATCTAAAACCTGGAGACCATGCTCTTCCAGTATTCACCGGCGAGTGTGGGGAGTGCCCACACTGTAAGTCGGAAGAAAGCAACATGTGCGACCTTCTCAGAATCAACACGGACAGGGGTGTTATGATCAGTGACGGCAAGTCCAGATTCTCTAAGAATGGACAGCCAATATACCATTTTGTGGGAACTTCCACGTTCAGCGAGTACACTGTTGTGCATGGTGGGTGTGTTGCTAAGATTGACCCTGCTGCTCCTCTTGACAAAGTTTGTGTTCTCAGTTGTGGGATCTGCACAGGTCTTGGTGCTACTGTAAACGTTGCAAAACCAAAACCCGGTTCTTCTGTTGCCATCTTCGGTCTTGGAGCTGTTGGACTTGCTGCTGCTGAAGGGGCGAGGATTTCTGGTGCATCCAGAATTATCGGGGTTGATTTAGTTTCGAGCCGATTTGAGCTAGCCAAGAAGTTTGGAGTTAATGAGTTTGTGAACCCAAAAGATCATGACAAGCCCGTGCAAGAGGTAATAGCTGAAATGACTAACGGAGGAGTGGATCGTGCGGTTGAATGCACGGGGAGCATCCAGGCCATGATCTCGGCATTCGAATGTGTCCATGATGGTTGGGGTGTGGCGGTACTAGTTGGAGTGCCAAACAAAGATGATGCATTCAAAACTCATCCAATGAATTTCTTGAACGAGAGGACTTTGAAGGGCACCTTCTATGGCAACTTCAAACCCCGCACTGATCTGCCTTCTGTGGTGGACAAGTACATGAGAGGGGAGCTGGAACTGGACAAGTTCCTCACTCATTCAGTCCCTTTCTCAGAGATCAACAAATCCTTTGACTACATGCTCAAGGGGGAGTCCATCAGATGCATCATTCGCATGGAGGAATAG 1248 0.4896 MKWWSTLLSVFRTSSEEYSTIFTVVVVLHTQYPVAMSTTAGQIIKCKAAVAWEAGKPLVMEEIEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPVFPRILGHEAGGIVESIGEGVNHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMISDGKSRFSKNGQPIYHFVGTSTFSEYTVVHGGCVAKIDPAAPLDKVCVLSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNFLNERTLKGTFYGNFKPRTDLPSVVDKYMRGELELDKFLTHSVPFSEINKSFDYMLKGESIRCIIRMEE 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0232 415 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 104 118 IPR002328 GO:0008270|GO:0016491
Lele02g0232 415 Pfam Zinc-binding dehydrogenase 241 369 IPR013149 -
Lele02g0232 415 SUPERFAMILY GroES-like 364 412 IPR011032 -
Lele02g0232 415 SUPERFAMILY GroES-like 39 222 IPR011032 -
Lele02g0232 415 Gene3D - 54 405 - -
Lele02g0232 415 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 204 378 IPR036291 -
Lele02g0232 415 CDD alcohol_DH_plants 44 412 - -
Lele02g0232 415 PANTHER ALCOHOL DEHYDROGENASE 41 411 - -
Lele02g0232 415 FunFam Alcohol dehydrogenase class-P 218 356 - -
Lele02g0232 415 FunFam alcohol dehydrogenase 1-like isoform X1 54 217 - -
Lele02g0232 415 Pfam Alcohol dehydrogenase GroES-like domain 71 197 IPR013154 -
Lele02g0232 415 Gene3D - 218 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0232 Lele-ChrLele02 1302724 1306336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0232 72 362 Monolignol Biosynthesis Gene Families AT1G72680 26.621 3.06e-13 68.6