Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0224 ATGATGGAGTCTTCGGGGTGGTTCAAACCCAACACCGACGCAGCTCCCTCTTGCCCCCGCTGTGCGTCCTCCAACACCAAGTTCTGTTACTTCAACAACTACAGCTTCTCCCAACCCAGGTACTTCTGTAAATCATGCCGCCGCTACTGGACCAAAGGCGGCTCTCTCCGCAACGTCCCCATCGGCGGCGCTTCCCGTAGGACCCGCCCTGCTAAACACTCTCGCCGTCCCCCTCAAACCTCTCGCCTTTCCATCAGTCTCATCTCCTGTTCTAGCGACCCACCTAATTCCCACCCCGAATCCTGTGGCTCCCATATTGACATGGCCCTTTTGTTCGCCAAGTTCTTCAACCAAAACACCACCTTCCACCAAGAATTCCATCACCAGCCCATGGATGGATCGTCCAGTTCATTGACACCGGAAAGCCTTGAAGCCCAAAACGATGAGACTCGACGGCCGTCCGATCCGGTCTCAGACTGCGATCACAATCTGATAGAGGGGCTTCCTCTGCAAGAGGCAGCTCAGAGTTTTTCGGGACATGAGTTGGAGGGTTTGTTTGGTTTGGATGAAGTGGTCCAAGATGTTCTCTGGTCTGATGCTACGACGTCGTCGGCGTTCGCCTGGCAACCTCCTAGTCCTATGATGGCATTTCCGGAGGAGTTGGAGTACTCGATGTCCATGGCGATGCCCTTCCTCCACAACGATCAATTCCCAATTACTTCCACAGTGCTTCCTTCAATTTAA 744 0.539 MMESSGWFKPNTDAAPSCPRCASSNTKFCYFNNYSFSQPRYFCKSCRRYWTKGGSLRNVPIGGASRRTRPAKHSRRPPQTSRLSISLISCSSDPPNSHPESCGSHIDMALLFAKFFNQNTTFHQEFHHQPMDGSSSSLTPESLEAQNDETRRPSDPVSDCDHNLIEGLPLQEAAQSFSGHELEGLFGLDEVVQDVLWSDATTSSAFAWQPPSPMMAFPEELEYSMSMAMPFLHNDQFPITSTVLPSI 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0224 247 ProSiteProfiles Zinc finger Dof-type profile. 16 70 IPR003851 GO:0003677|GO:0006355
Lele02g0224 247 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 11 146 IPR045174 GO:0003700|GO:0006355
Lele02g0224 247 MobiDBLite consensus disorder prediction 126 144 - -
Lele02g0224 247 ProSitePatterns Zinc finger Dof-type signature. 18 54 IPR003851 GO:0003677|GO:0006355
Lele02g0224 247 MobiDBLite consensus disorder prediction 126 157 - -
Lele02g0224 247 MobiDBLite consensus disorder prediction 59 83 - -
Lele02g0224 247 Pfam Dof domain, zinc finger 15 69 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0224 Lele-ChrLele02 1264162 1264905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0224 2 117 C2C2-Dof Transcription Factor Family AT3G52440 53.279 1.04e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele02g0224 zf-Dof 5.4e-31 No_clan