Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0213 ATGTGTCTGAACGCGCCCTCCTCCTCCCTTGAAACCCCCGACTTGTTGATCCGTCCCATCATTGCCACATTCGAGAAGGCTCTCTCTCTCCTCAACTGCTCCGCCAAACACTCCGCCGCCCTGCTGCCCGACTCACCGCTCCTCACTCCTCCCAGCCAAGACTCCCCCAAGGATTTCCAGCTCCAACACCAAGGATACTATAGATGCACCCATAGACACGCGCGAGGATGCTTGGCCACAAAGCAAGTGCAGCGATCCGACGTCGACCCGATGGTCATGGAAGTCAATTACAGGGGAAACCACACCTGCAAGCTCGCCTCCAGCCCCAGCCCTGCTCCTCCGTCACAAGAACAGCTCGTGAACCTACTTGCTGGCGTCAGGGTGCTGACGGAGAATTTAAATGCCTCCGACCAAACCTCTTTTGCTTCGTCCCTGTTGCCTTCGACTTCCAACGTCAGCCCCGACAACACCGACTCCATGTGTCCTGCCATCGACAACAATGTTGTTGACCTTAAGTTCTCCTCCCCACATGTCTCCGCCCACCTCCGCAACAGCCCACTTTTCGGCATCTACAAGAGTGGTCAGTAG 588 0.5663 MCLNAPSSSLETPDLLIRPIIATFEKALSLLNCSAKHSAALLPDSPLLTPPSQDSPKDFQLQHQGYYRCTHRHARGCLATKQVQRSDVDPMVMEVNYRGNHTCKLASSPSPAPPSQEQLVNLLAGVRVLTENLNASDQTSFASSLLPSTSNVSPDNTDSMCPAIDNNVVDLKFSSPHVSAHLRNSPLFGIYKSGQ 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0213 195 Gene3D WRKY domain 51 106 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g0213 195 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 65 155 IPR044810 GO:0003700
Lele02g0213 195 SUPERFAMILY WRKY DNA-binding domain 63 105 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g0213 195 SMART WRKY_cls 56 105 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g0213 195 Pfam WRKY DNA -binding domain 64 104 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g0213 195 ProSiteProfiles WRKY domain profile. 64 106 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0213 Lele-ChrLele02 1181149 1182048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0213 64 128 WRKY Transcription Factor Family AT2G46400 49.254 5.26e-16 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele02g0213 WRKY 1.5e-11 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0213 02 1181149 1182048 Lele03g0221 03 1203012 1204332 hybridization
Lele02g0213 02 1181149 1182048 Lele44g0192 44 1217987 1219713 hybridization