Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0204 ATGCGCGTGGGAATTGACAAAGGCTCAGTAGTGCCTACCAATGAGAGAAATATGTATGCGGACACTGGTCTCTTGTTCCCGTATTTCCAGAATTCATCTCAAGAGCTTCAACAACTCGACGAGTACTGTAAAACCCATAAGCCCAATGCTTCAATGAGTGACCTTGCTCAGTCTACCGCCATGTCGGAGTATTTTGATTTGGCAGCAGAAGGAGACCTGTTCAAAGCTCCCAAACCTATATTTGAAGAACCAGTCATGGATTTGGATCCCATGACGGCAGCCATTTCAATGATATCTTGTGGGGAAGACGTTGTCTCCTCACAGGGATTAAAACCCCCAGACTCACTTCAACACGAACAACTCCTGAGCGAGATTTTCTATGAATGCAAAAAAGACATGCTCGAAAAGGAAGCAATTGAGTCACCTCTATCTGAGATTCTGGAAATCAAGGTTCCTGCTCTGAATACAGATGAAAACCAAACTCAAGAAAGTACAATATTTCCTGGCTTGCCATTACCGAAAAGTGTGAGTTCAGGATGTTTGAGCTCAATGGACTGGATGCAAGGAACTTCAATGAAGCCTTCTTTTATTGATTTCCCAGGAATTAATTTCTGTGCAGATTATGGCATGCGGAGGGCATTTAGTGAAGGAGATATAAAGGCTCTTGGTAGTGGTAATATGTACGCTATCCAATCTCCCTTAGAGAGGCCGTTTCCGGCCAGTAATTGTACCAGCGAGGAACGCCGAGAAAAGCTCTCCAGATACAGGAGTAAGAGGACGAGGAGAAATTTTGGGCGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGCCAACCAAGAATCCGTGGAAGATTTGCCAAGACTGAAGAATTTGACGCCAGGAGGCAATGTTAG 900 0.4467 MRVGIDKGSVVPTNERNMYADTGLLFPYFQNSSQELQQLDEYCKTHKPNASMSDLAQSTAMSEYFDLAAEGDLFKAPKPIFEEPVMDLDPMTAAISMISCGEDVVSSQGLKPPDSLQHEQLLSEIFYECKKDMLEKEAIESPLSEILEIKVPALNTDENQTQESTIFPGLPLPKSVSSGCLSSMDWMQGTSMKPSFIDFPGINFCADYGMRRAFSEGDIKALGSGNMYAIQSPLERPFPASNCTSEERREKLSRYRSKRTRRNFGRKIKYACRKALADSQPRIRGRFAKTEEFDARRQC 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0204 299 Pfam CCT motif 248 290 IPR010402 GO:0005515
Lele02g0204 299 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 157 291 IPR045281 GO:0009909
Lele02g0204 299 ProSiteProfiles CCT domain profile. 248 290 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0204 Lele-ChrLele02 1103689 1107713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0204 244 289 C2C2-CO-like Transcription Factor Family AT5G24930 56.522 1.67e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele02g0204 CCT 4.6e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0204 02 1103689 1107713 Lele03g0209 03 1115086 1117630 hybridization
Lele02g0204 02 1103689 1107713 Lele04g0205 04 1154752 1161392 hybridization