Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0194 ATGGGGAAGAAAGGAGGCGGATGGTTCTCCTCAGTGAAGAAAGTTTTCAAATCGTCTTCTAGTAACAAGGACTCGTCGGCGTCGTCTAGGAAGAAGGATAGTGAAAGAAGGCAGCCTGAAGTGGTGGAGGTCGTGTCTTTTGATCATTTCCCCCCGGAGAGTTCTCATGACGATGGCACCAATGAGAACAGCATAGCATCCACGCCTGTGGCTGAAGATAGAAATCATGCCATTGCGGTGGCTGCGGCCACAGCGGTGGCTGCAGAAGCAGCGGTTGCAGCGGCACAGGCGGCGGCCAGAGTTGTTCGGATGGCAGGTTACGGGCGCCAAACTAAGGAAGAAAGAGCAGCAACTCTCATTCAATCATACTACAGAGGCTACCTAGCAAGAGTAAGAGCTCGCAGATTCCAGTTGAGCCACCAAGAGCAACGTCGCAAGGCAGAGGATGAGACAGAATTTGAGGAGCAAGTGGCGAGACCTATGAGCCCCATGAATACGTGGGACTATAGGCGTCACGGCAGGCACAAAATGCAGCAAAATGATGCCAGGAAACACGACGCCCTAATGAAGAGGGAGAGACCTGTCGCTTACGCTCTCGGCTCTCGGTCAGACCCCAACAGCGACCATGTTGTAACCATGGAGTACAACAACGAGCGTGAGAAGGCCCCGTGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCACAGCCGTACAATGTCCGGAACGTGGGGCCACGGGAGACCTCTTACATGACGCTTGCCACCACAACCCCCACCACCACCGACGACATGTCTGAAAGGACGGTGGAGATGGACATGGTCGCGCCTTTAGGCTCAAGCAACGTCAGCGCTATGGGCCTAATGAACCAGGAGTTTCTCTATTCAAGCCCAATGTCCAACACAAAACACCATCGACAATTCAGTTTAAATGTGCCAAGCTATATGGCTCCGACCCATTCCGCGAAGGCCAAGGTGCGGGGTCAGGTGCCGATCAAGCCACGTGGCTCACCTGGGCCCCAGTGGAACTCGTCCACAAAGAAAGGGCCCGGTATCGGGTCGGTCTGTGATTCCTCAAGCTCCGGAGGAGGAACGACGAATTACCACTTCCCGAGGAGCCCCAGCCCAAAAATGAATGGGAGTCGGCCGCAGTCTAGGAGGATTGCGGGTAGCAGCCCAGATTATTCGGGCTTTGAGGACTGGGCACTTCCTCTCGGAGGCCATGGCTGGGCATGA 1233 0.5507 MGKKGGGWFSSVKKVFKSSSSNKDSSASSRKKDSERRQPEVVEVVSFDHFPPESSHDDGTNENSIASTPVAEDRNHAIAVAAATAVAAEAAVAAAQAAARVVRMAGYGRQTKEERAATLIQSYYRGYLARVRARRFQLSHQEQRRKAEDETEFEEQVARPMSPMNTWDYRRHGRHKMQQNDARKHDALMKRERPVAYALGSRSDPNSDHVVTMEYNNEREKAPWGWNWLERWMSSQPYNVRNVGPRETSYMTLATTTPTTTDDMSERTVEMDMVAPLGSSNVSAMGLMNQEFLYSSPMSNTKHHRQFSLNVPSYMAPTHSAKAKVRGQVPIKPRGSPGPQWNSSTKKGPGIGSVCDSSSSGGGTTNYHFPRSPSPKMNGSRPQSRRIAGSSPDYSGFEDWALPLGGHGWA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0194 410 Pfam IQ calmodulin-binding motif 114 133 IPR000048 GO:0005515
Lele02g0194 410 ProSiteProfiles IQ motif profile. 113 142 IPR000048 GO:0005515
Lele02g0194 410 MobiDBLite consensus disorder prediction 323 410 - -
Lele02g0194 410 PANTHER IQ-DOMAIN 5-RELATED 129 349 - -
Lele02g0194 410 MobiDBLite consensus disorder prediction 16 66 - -
Lele02g0194 410 Pfam Protein of unknown function (DUF4005) 296 334 IPR025064 -
Lele02g0194 410 SMART iq_5 112 134 IPR000048 GO:0005515
Lele02g0194 410 MobiDBLite consensus disorder prediction 337 390 - -
Lele02g0194 410 MobiDBLite consensus disorder prediction 26 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0194 Lele-ChrLele02 1051203 1053583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0194 1 376 IQD Protein Family AT3G49260 40.757 3.87e-61 203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0194 02 1051203 1053583 Lele02g0194 02 1051203 1053583 ECH
Lele02g0194 02 1051203 1053583 Lele03g0200 03 1058571 1061149 hybridization
Lele02g0194 02 1051203 1053583 Lele04g0192 04 1062639 1066898 hybridization