Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0187 ATGGCACTGTCAAGCCCACACATCCAAAGATTAGTCGTAACCCAACTCCATGGCCGTTCCACCTCCAATAACAGCATCCGCAGAAACAGCGTCGCCAATACTAGCAGGGGCCGCTGCTGCTCCGCCATAGCCATCGACACTCCGTCGTCGTTGTCTGACGTGGCAGGCATCCGATGGGGATCCGTTGCTTTGCAGGGTCTTCGCGAAGAGATGGAAGATGGCATTGTTCTTCGTCCTGATGGCCTCCACGGCTTCTCTTTTGCAGCTGTGTTTGATGGCCACGGAGGATTTTCGTCCGTCGAGTTCCTCAGGGATGAACTGTACAAGGAGTGCCTTGCAGCTTTACAAGGGGGGTTAATATTGGATAGAAAGGATTTCCAAGCCATTAAAGCAGCATTACAGGATGCATTTGTCAATGCTGACAAAAGTTTGTTAAAACGGCTTGAAATGAATGAAGATGAAGATGAATCTGGCGCTACAGCAACTGCAATGTTCCTCGGAGATGATATGCTTCTCATTTCACATTTAGGCGACTCAACTGCGGTTCTTAGCCGGTCTAGTAGAGCAGAAGAGCTGACTAGTCCCCATCGACCATATGGGAGCAATAAAGCCTCTCTTCAAGAAATTAAAAGAATCAGAGAAGCAGGTGGATGGATTGTCAATGGTAGAATTTGTGGAGATATTGCTGTATCTCGTGCATTCGGGGATATAAGATTCAAAACAAAGAAGAATGAGATGTTGAGAAAAGGGGTTGAGGAAGGAAGATGGTCAGAAAAATTTGCTTCTCGTGTGCAGCTCAACGGAGACTTGGTCATTGCATGCCCTGATATTTATCAAGTACAGCTTGGCTCGGATGCAGAATTTATAGTATTGGCATCTGATGGCTTATGGGACTACATGAGCAGCTCAGAAGCAGTTTCTTTTGTGAGGAATCAACTTCGAGAGCATGGTAATATTCAGTTAGCTTGCGAAGCTCTTGCACAAGCAGCTCTGAATCGACGCACACAGGATAACATTAGCATCATAATTGCTGATTTAAGGCGGACGGACTGGCAGAAGTTGCCACTTGAGCAGCAAAACGTGATTTACGAGGCGGTGCAAGCTTTAGCCACCATTGGAATAGTGTCACTTGGAATTTGGTTTTCATCGCAGATGTTATGA 1161 0.4643 MALSSPHIQRLVVTQLHGRSTSNNSIRRNSVANTSRGRCCSAIAIDTPSSLSDVAGIRWGSVALQGLREEMEDGIVLRPDGLHGFSFAAVFDGHGGFSSVEFLRDELYKECLAALQGGLILDRKDFQAIKAALQDAFVNADKSLLKRLEMNEDEDESGATATAMFLGDDMLLISHLGDSTAVLSRSSRAEELTSPHRPYGSNKASLQEIKRIREAGGWIVNGRICGDIAVSRAFGDIRFKTKKNEMLRKGVEEGRWSEKFASRVQLNGDLVIACPDIYQVQLGSDAEFIVLASDGLWDYMSSSEAVSFVRNQLREHGNIQLACEALAQAALNRRTQDNISIIIADLRRTDWQKLPLEQQNVIYEAVQALATIGIVSLGIWFSSQML 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0187 386 Gene3D - 57 353 IPR036457 -
Lele02g0187 386 ProSiteProfiles PPM-type phosphatase domain profile. 58 346 IPR001932 -
Lele02g0187 386 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Lele02g0187 386 FunFam Protein phosphatase 2C 57 57 353 - -
Lele02g0187 386 Pfam Protein phosphatase 2C 60 339 IPR001932 -
Lele02g0187 386 CDD PP2Cc 57 346 IPR001932 -
Lele02g0187 386 SMART PP2C_4 48 344 IPR001932 -
Lele02g0187 386 SUPERFAMILY PP2C-like 53 347 IPR036457 -
Lele02g0187 386 PANTHER PROTEIN PHOSPHATASE 2C 32 344 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0187 Lele-ChrLele02 1014882 1018432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0187 1 323 PP2C-type Phosphatase Gene Family AT4G27800 62.154 4.06e-146 415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0187 02 1014882 1018432 Lele02g0187 02 1014882 1018432 ECH
Lele02g0187 02 1014882 1018432 Lele03g0191 03 1018202 1021756 hybridization
Lele02g0187 02 1014882 1018432 Lele04g0184 04 1025559 1029113 hybridization