Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0177 ATGGCGGGTTCGTCCGAGACGAAGTTCGTCCAAGATTTGTTATTGTACGCGGCAAGTGCGGCGCTCAGTTGCCTGGTTTTGTTCGCTGGGCTTCGACACCTCGACCCTAATCGTGAGACATCAAAAAAAGCTCTTCAACACAAGAAAGATTTAGCTAAGCGTCTCGGTCGTCCTCTCATTCAAACAAACGCTTACGAGGATATCATAGCCTGTGATGTTATTAATCCCGACCACATTGATGTGAAGTTTGACTCCATTGGGGGACTGCAAACAATTAAGAAAGCTTTGTTTGAGCTTGTTATACTGCCGCTTAAACGACCTGAACTATTCTGTCATGGCAAACTTCTTGGCCCACAAAAGGGGGTCCTCTTGTATGGACCCCCTGGTACCGGGAAAACCATGCTTGCCAAAGCTATTGCAAAGGAGTCTGGATCAGTTTTCATTAATGTAAGGATATCAAACCTGATGAGCAAGTGGTTTGGTGATGCCCAGAAACTTGTGGCTGCTGTATTTAGCCTGGCTTATAAGCTCCAACCTTCCATCATATTCGTTGATGAAGTTGACAGCTTTTTGGGTCAGCGTCGTACAACAGATCATGAGGCAATGTTAAACATGAAAACTGAGTTCATGACTTTATGGGATGGATTTACCACTGATCAGAATGCTCGAATTATGGTCCTTGCAGCAACCAATCGTCCCTCAGAACTTGATGAGGCCATATTAAGGCGGTTTCCTCAAGCTTTTGAAATTGGACTTCCAGACCAAAGGGAGAGGGCTGAGATATTTAAGGTTATCTTAAAGGGTGAGAGAGTTGAAGACAACATTGACTTTGATCATATAGCTGCCTTGTGTGAGAGATATACTGGTTCAGATCTGTTTGACCTCTGCAAGAAGGCTGCCTATTTTCCCATTAGGGAACTGCTGGATAAAGAAAGGCAAGGGAGAAATGCTTCTGAACCAAGGTATTTGACGCAGTCAGATTTGGAGAAGGCTCTCACCACTTCACTGAAAACAAAGGTTGCTGCTGGTGAATACAGTGGATTCAATGTACAGTCATCAAGAAGGCCAGGACACAGGGAGTCAGGTGATTATCAGTTTCAAGCTGCAATCAATGAACTCTCTAAGCTTGTGGTTTCTCAAATTATTAACCTCCAATCAGATGCGCAGGATCCGTAA 1176 0.443 MAGSSETKFVQDLLLYAASAALSCLVLFAGLRHLDPNRETSKKALQHKKDLAKRLGRPLIQTNAYEDIIACDVINPDHIDVKFDSIGGLQTIKKALFELVILPLKRPELFCHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGSVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPSIIFVDEVDSFLGQRRTTDHEAMLNMKTEFMTLWDGFTTDQNARIMVLAATNRPSELDEAILRRFPQAFEIGLPDQRERAEIFKVILKGERVEDNIDFDHIAALCERYTGSDLFDLCKKAAYFPIRELLDKERQGRNASEPRYLTQSDLEKALTTSLKTKVAAGEYSGFNVQSSRRPGHRESGDYQFQAAINELSKLVVSQIINLQSDAQDP 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0177 391 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Lele02g0177 391 SMART AAA_5 118 254 IPR003593 -
Lele02g0177 391 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Lele02g0177 391 Gene3D - 253 333 - -
Lele02g0177 391 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 32 343 - -
Lele02g0177 391 CDD AAA 116 252 - -
Lele02g0177 391 FunFam ATPase family AAA domain-containing protein 1 80 257 - -
Lele02g0177 391 Pfam AAA+ lid domain 274 309 IPR041569 -
Lele02g0177 391 Gene3D - 80 335 IPR027417 -
Lele02g0177 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 333 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0177 Lele-ChrLele02 952487 954888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0177 37 316 Calmodulin-binding Proteins AT3G56690 31.338 1.90e-36 139