Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0170 ATGGAGACGATGGAGAGAAGACGACAACGCGCAGGGCTGGCCTCCGCTTACGCCAGAAAGCACCAAATGACAGAGTGCCGTGTCTTGTGGGACTACCCTTCCTCCCATCTAGGCTCTACTTCATTAAGAGGATCCCCAGTTTCCTGGAGCACTCGTCTGGCTTCATGCCTACCCAATAAAGTTGCCATACCAATTGCCCTTGACATGAAATCACTCTACTTTTCAACTCAGGAAACTGCTACCACTAGTTTACTAATGATGGTGGGTGGTGAGTATATTCGTGCATCAAAGGAACGTAATATTGGAGGCTTCACCGGCTCAAAGCCACCTGAGAATCCGAGAAAGAAGAACAGCATAGAAAACAAGAGGAGGTTTAGTGATGAACAAATTCGATCGCTTGAATGCATATTTGAGTCAGAATCAAGGCTTGAGCCGAGAAAGAAGATGCAACTAGCAAGAGATCTTGGGTTGCAGCCGCGCCAAGTTGCCATATGGTTCCAGAATAGAAGAGCCAGATGGAAATCAAAACACATGGAGCAAGAGTACGGGAAACTCAGAGATGACTATGACAATTTAGCATCTCTGTTTGAGTCCATAAAGAAAGAGAAGGAATCCTTGCAAGCTGAGGTACAAAAGCTGAGAGATTTAGTGGAGACCTGTGATGATGGTGGTAAAAGGGAAAACATGGTTGGGATGGAAAATAGCACAGAGGATGGTGCTTCAGGCAGCGGACAAAACAACATGATCGCTGAAGCAAAGCCAAATTTCTCAAATGAAGGTTCAGAGAATGCCAAGAATGATGATATAAGAGAATTGGGATCGATTGAAAAATTGTACAGTGTTGATCCAAGTGGTCTCTTGGATCAGTCTTGCAGCAGTTCGCAGTGGTTAGATTTCTGGAATTGA 906 0.4492 METMERRRQRAGLASAYARKHQMTECRVLWDYPSSHLGSTSLRGSPVSWSTRLASCLPNKVAIPIALDMKSLYFSTQETATTSLLMMVGGEYIRASKERNIGGFTGSKPPENPRKKNSIENKRRFSDEQIRSLECIFESESRLEPRKKMQLARDLGLQPRQVAIWFQNRRARWKSKHMEQEYGKLRDDYDNLASLFESIKKEKESLQAEVQKLRDLVETCDDGGKRENMVGMENSTEDGASGSGQNNMIAEAKPNFSNEGSENAKNDDIRELGSIEKLYSVDPSGLLDQSCSSSQWLDFWN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0170 301 CDD homeodomain 122 177 IPR001356 GO:0003677
Lele02g0170 301 Pfam Homeobox associated leucine zipper 176 217 IPR003106 GO:0006355|GO:0043565
Lele02g0170 301 SUPERFAMILY Homeodomain-like 110 176 IPR009057 -
Lele02g0170 301 Pfam Homeodomain 122 174 IPR001356 GO:0003677
Lele02g0170 301 PRINTS Lambda-repressor HTH signature 147 156 IPR000047 GO:0003677
Lele02g0170 301 PRINTS Lambda-repressor HTH signature 156 172 IPR000047 GO:0003677
Lele02g0170 301 ProSitePatterns 'Homeobox' domain signature. 151 174 IPR017970 GO:0000981|GO:0006355
Lele02g0170 301 MobiDBLite consensus disorder prediction 224 265 - -
Lele02g0170 301 FunFam Homeobox-leucine zipper protein ATHB-7 105 176 - -
Lele02g0170 301 Coils Coil 189 219 - -
Lele02g0170 301 MobiDBLite consensus disorder prediction 234 262 - -
Lele02g0170 301 ProSiteProfiles 'Homeobox' domain profile. 116 176 IPR001356 GO:0003677
Lele02g0170 301 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 113 254 IPR045224 GO:0003700
Lele02g0170 301 MobiDBLite consensus disorder prediction 99 120 - -
Lele02g0170 301 Gene3D - 106 187 - -
Lele02g0170 301 SMART HOX_1 119 180 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0170 Lele-ChrLele02 922015 926051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0170 121 209 Homeobox Transcription Factor Family AT2G46680 76.404 5.88e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele02g0170 Homeodomain 9e-17 CL0123