Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0162 ATGTGTGGTGCGAATGTTGGAAATATGGGTGAATTTGGCGTTTCGGACAAGGAAGGTGCAAAAAATAGCAACAACGGTGGTGTTGGGTTGGGTATGAAGATGCAGAAGCAGAACCTTGAAGCATTCCCTAGTAAGACCATGATGATGATGATGGTTTCCCCTCCTCATAATCATCACGATCCTCCACTATATGGTCCCTTTGCTGCTGCTGGTGATTGTGATGGTCCTACACCTTGTAAGTCCCTGACTCATTATACAAACCATTTTGTTAATGCTGCTTCTGCTTCTGGTGTTGCACTTGTTAGACCCTTGCAGCCTTTTCACTTTTCTGCTTCAACCGCCTTCAAATCCTCAGGAGGGGTGATGGCGCCTTCGCTGGGATTTCCTTTCACACAAGCACAATGGAAGGAGCTCGAAAGACAAGCAATGGTATACAAGTACATGATGGCCTCCATTCCTGTTCCTCCTCATCTGCTTATCCCTGTGCCTGCTTCTCGCTCTCCCTTGGATGCCGGTTTCAATCTAAGGTTCTCAAGCAGTAGTGATGTAGAGCCAGGGAGGTGCAGAAGAACAGATGGGAAAAAATGGAGATGTTCAAGAGACGTAGCCCCTAACCACAAGTATTGCGAGCGTCATATGCACAGAGGTCGTCCCCGTTCAAGAAAGCATGTGGAAATTCAAGCCACCACCAACAATAATCAGCAAATCAACAGAACTAGCCAAGATTATCCTTCTTTATCTACTCCTACCATGACTACCAGTCAGCCATACTTTGAATCTTCCATTTCTCTTGATAAGCTCGGTTTCAAAGCTGCAAATTTTGATTCCCTTTCTTCTGTTTCAAGAGGCGTGGACTGGAGGATGCTGAAAGGAGACACTAATCCCATGGATCCGCAATGGCATCCTCTTGTACAGAACAAACTCGGATTGAATACGGCAAGTTCCTGTAACAAGGAGGACGCCTCGATTTCAATCACTCGTTCCAATAGCCCTCTGTATACGAATTGGTATGATGTTTTCAGTTCTGAACGAGACCAAAACGACAAGCGCTCCCCTTTGTACCTCAACCCTCGCTCTGTAAAACCAAGAGCTTCCACTGATGCTTGGTCGAGTGCATCAAATAACAAGATATCACTTTCTTCTCTTGACTTGCCAGTGCGTGGTGGTGTTGAAGAACACATGGCTTCTGTTCATATGGACTTGGGCCGAATGGATCCCCCAGGAAATTGGGCCGGTTGTTCAACTCCTGGGGGCCCACTGGCTGAAATGTTGAGACCCAGCAAGGTGGCAGCCCCAACCAATGAGGGCCCTATGGCAACAATGGTGTCATCTCCTTCTGGGGTGCAGCAGAAGACGCTTGCTTCATTCTCTGATAGCAGCAGCAGTAGCAGCCCGAGGCCGAGGGTAGGGTCTTCCAGGGCCAATTCTGATATGGCCTTCCTCTGCTTTAATCACGCCAGACTACCTTCTTAA 1473 0.4773 MCGANVGNMGEFGVSDKEGAKNSNNGGVGLGMKMQKQNLEAFPSKTMMMMMVSPPHNHHDPPLYGPFAAAGDCDGPTPCKSLTHYTNHFVNAASASGVALVRPLQPFHFSASTAFKSSGGVMAPSLGFPFTQAQWKELERQAMVYKYMMASIPVPPHLLIPVPASRSPLDAGFNLRFSSSSDVEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKHVEIQATTNNNQQINRTSQDYPSLSTPTMTTSQPYFESSISLDKLGFKAANFDSLSSVSRGVDWRMLKGDTNPMDPQWHPLVQNKLGLNTASSCNKEDASISITRSNSPLYTNWYDVFSSERDQNDKRSPLYLNPRSVKPRASTDAWSSASNNKISLSSLDLPVRGGVEEHMASVHMDLGRMDPPGNWAGCSTPGGPLAEMLRPSKVAAPTNEGPMATMVSSPSGVQQKTLASFSDSSSSSSPRPRVGSSRANSDMAFLCFNHARLPS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0162 490 MobiDBLite consensus disorder prediction 437 471 - -
Lele02g0162 490 MobiDBLite consensus disorder prediction 347 372 - -
Lele02g0162 490 SMART QLQ_2 128 164 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele02g0162 490 MobiDBLite consensus disorder prediction 430 474 - -
Lele02g0162 490 ProSiteProfiles QLQ domain profile. 129 164 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele02g0162 490 Pfam WRC 184 225 IPR014977 -
Lele02g0162 490 ProSiteProfiles WRC domain profile. 182 226 IPR014977 -
Lele02g0162 490 PANTHER GROWTH-REGULATING FACTOR 5 108 378 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele02g0162 490 Pfam QLQ 129 162 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0162 Lele-ChrLele02 895840 898674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0162 120 461 GRF Transcription Factor Family AT5G53660 34.409 4.96e-47 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele02g0162 WRC 3.4e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0157 01 904425 906805 Lele02g0162 02 895840 898674 ECH
Lele02g0162 02 895840 898674 Lele02g0162 02 895840 898674 ECH
Lele02g0162 02 895840 898674 Lele03g0165 03 881250 884527 hybridization
Lele02g0162 02 895840 898674 Lele04g0161 04 901616 904290 hybridization