Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0161 ATGGGTATTTGCCTTGGTGTTTGTGACTCTGCTCTGGACAAGCAGGGTAGATATGTGAGGGTGGCGAAATCCGACGGAGACGTACTTGAATTCAGCTCGCCTGAGGAAGCCTCGCATCACAAATTTTATTACTTGCCTCCCGATCTGCCAAACGCGGACGCAGGTAGTGGCATCAAAAGGCTCAAACTTGTCATCACAAAGCAGCAGCTTGAGCAGTTACTCGCCAAACAGATTTCCTTAGAGGACGTACTTTCCCACTTCCAAAGTAGGACTCTTGATTTGCCCGCCAATTGGAGGCCCCGGCTGGATTCTATCCCCGAGGAAATGAACCCTCGCTTCATCAGTAATGATCCGACACCCAGTAATTGCAAGTCTGAGATTTGTATCATTGGCAGCACAATCTATAGTAATTTCCCATCAATTATATCACTTATATTATGCACCCGCGACATCACGAAGTCCTACAATGAGGACGCAGAACTAGAAAACAGGGTACAGATGCAGAGTCCCCAGTGGACAGGGCACAAAGAATCTGTCCGTGAACGAATCATTTGGGCAGGAGGGAGCTCGTGGTTGGCAACTGTGAGAAGGGCTTTCAGGTCTCCTGGCAAAGAAAAGGACAAGAAAATCAGCAGTACAAGAGAAGAGCGTGGGCAAGAGGAGGAGGAAAAGGCGCCCCTCTCAAACACATACTTCATTTTGAACTTTATTTCTACACTGCAATATGAGTTCACTGTTTTCACTAAACAAGGATTATCTTTCTTTAATGTGCAGAAGAGGGGAAAAAGAAGATGGTTCAGAAACCCCTTTGGCCAAGAGACAACAACCCAGCATTGCGAAGAAAGAACCATAACAAGTGTAGCTGATGTGACGGCGACAAGTTGTGACGCGGAGCAAAGGCATGCGATTGCAGTAGCCATGGCAACCACGGCAGCCGCTGAGGCAGCGTTAGCAACCGCTCAAGCAGCCGTGGAGGTTGTTCGCCTTTCTAAGCCTTCCTTCTTTGTCAGAGAACACAACGCAGCCATTGTAATCCAAACAGCTTTCAGAGGCTACCTGGCCAGGAGAGCTCTTGGGGCACTTAAAGGATTAGTGAAGCTGCAAGCATTAGTGAGAGGTCATAACGTACGAAAACAAGCTAAACTAACACTGCAGTGCATGCAAGCTCTGGTTCGAGTTCAAACACGAGTATGCCAACAGCGAGCCAAGCGGCTCCCACAACATGAAAGAGCCACAGATTCCACAGACGAGAGTGGGACAGAGGAAGTGTGGATGCGCTGGGATGACCACCCACGAACGGTAGATAACCTTCGAGCTGTCCTGCAGAGAACAAAGGAAGCTGCCTTGAGACGTGAAATGTGCCTGGCTGATGCCTTCTCTCATCAGATATGGACAACTGGTACAGAATCATGCACCAGCGAGGAAGAGGTAGAAGACAGATACGGCCCCAGGTGGAGGAGAAGGCATAGAGAGAACATAGGCAGAGCTTCCTGTGATCGAAGAGACCCCATCAAAATAGTTGAAACCGATACACACAGTCCTTACTCTAAACCTGAGTTCGCTAAACCGCCGAGACTTTCATTTTCTAGGCCTAATAAAGCCCAATACGAGATGTTAACGGCAATGACACCCCCACCAATGAAGATGAAGCATGTTGAGATGCATTCAGCTAGTACTACTCCTCGTGCAAAGTTCAATACTTTGATGCCAAACTATATGGCGGTCACTGCATCCGCGAGGGCTCGGTCTCGCTCACAAAGCATCCTCAGATACAGGGATTCAACCCCTGAGAAGGAAAAAATAGGATCCATTAAGAAACGCCTTTCATTCCCAGTTCTTAATTCTTGTGATGGTGTAGACACTTGA 1866 0.4812 MGICLGVCDSALDKQGRYVRVAKSDGDVLEFSSPEEASHHKFYYLPPDLPNADAGSGIKRLKLVITKQQLEQLLAKQISLEDVLSHFQSRTLDLPANWRPRLDSIPEEMNPRFISNDPTPSNCKSEICIIGSTIYSNFPSIISLILCTRDITKSYNEDAELENRVQMQSPQWTGHKESVRERIIWAGGSSWLATVRRAFRSPGKEKDKKISSTREERGQEEEEKAPLSNTYFILNFISTLQYEFTVFTKQGLSFFNVQKRGKRRWFRNPFGQETTTQHCEERTITSVADVTATSCDAEQRHAIAVAMATTAAAEAALATAQAAVEVVRLSKPSFFVREHNAAIVIQTAFRGYLARRALGALKGLVKLQALVRGHNVRKQAKLTLQCMQALVRVQTRVCQQRAKRLPQHERATDSTDESGTEEVWMRWDDHPRTVDNLRAVLQRTKEAALRREMCLADAFSHQIWTTGTESCTSEEEVEDRYGPRWRRRHRENIGRASCDRRDPIKIVETDTHSPYSKPEFAKPPRLSFSRPNKAQYEMLTAMTPPPMKMKHVEMHSASTTPRAKFNTLMPNYMAVTASARARSRSQSILRYRDSTPEKEKIGSIKKRLSFPVLNSCDGVDT 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0161 621 MobiDBLite consensus disorder prediction 203 223 - -
Lele02g0161 621 ProSiteProfiles IQ motif profile. 338 366 IPR000048 GO:0005515
Lele02g0161 621 Gene3D - 336 389 - -
Lele02g0161 621 Pfam IQ calmodulin-binding motif 339 357 IPR000048 GO:0005515
Lele02g0161 621 Pfam IQ calmodulin-binding motif 365 381 IPR000048 GO:0005515
Lele02g0161 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 334 382 IPR027417 -
Lele02g0161 621 ProSiteProfiles IQ motif profile. 362 389 IPR000048 GO:0005515
Lele02g0161 621 SMART iq_5 337 359 IPR000048 GO:0005515
Lele02g0161 621 SMART iq_5 360 381 IPR000048 GO:0005515
Lele02g0161 621 Pfam Protein of unknown function (DUF4005) 545 616 IPR025064 -
Lele02g0161 621 PANTHER IQ-DOMAIN 5-RELATED 246 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0161 Lele-ChrLele02 889850 894803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0161 191 612 IQD Protein Family AT4G00820 35.497 2.72e-61 211