Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0142 ATGGGTGCGGCCGTCGAGTGTTGTCCGCCTCGCGTTGATGAGGTGGCAGTTTTGCCTCTGAATTTGCTTCCTCTAGGTTTCAGGTTTCGACCTACGGATGAAGAGCTGATCGATTACTATTTGCGACAGAAGATCAACGGAAATGGGAGTGACGTATGGGTTATTCGAGAAATTGATGTTTGCAAATGGGAGCCTTGGGATTTGCCTGATTTATCGGTTATACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCGCAGGATCGCAAATATCCAAATGGGCATCGATTGAACCGAGCAACGACTCATGGGTACTGGAAGGCAACGGGTAAAGATCGCAGAATTAAGTCTGGGTCGAACTTGATTGGAATGAAGAAGACTTTAGTGTTCTATACTGGTCGTGCACCCAGAGGGAAGAGGACCAATTGGGTTATGCACGAGTACCGTCCTACCCTAAAGGAGCTCGATGGTACCAATCCTGGGCAGAGCGCATATGTCCTTTGTCGTTTATTTAAGAAGCAAGATGAGACTCTTGAAGGTTCAAACTGTGAGGGAAATGACCGGACTGTGTCAACTCCAACTACTGCTAATTGCTCTCCAGAAGAAATACAATCAGATGCTGTTCCAACGGATGCTTCTCCATCACTAGCTACTGAAGATGATAAGAACAGGGCAGCTCCATTCTGTATCTCTGATAATTCTGATGAAGCCACATCCAACATTATAACACCGAGTGATTACAACAGCAAAGAATATGAAATTTGCGATGTACAAAATAAGATTGTTATTCCAACAACTGAAGAGGAAGATCAACTCCTGAACCTTGACATATTTTATGATCCAACAACTGAACCATTGGATGGCAAACTCTTCTCTCCTGTACATCAGCATATCCCTCCAGAATTTTGTTTTACTTCAAGCAATGAATTGGATAATTGTGGGTTGCAACTTCAGTATGGGACAAATGAGGTTAATATGACTGAGTTTTTAAACTCAGTTGTCAACTGGGATGAGTTATCCTGTGATTCCAGCAGTCAAATGCCCACTTCCACCTTGGTTGATGCTAAGGATAATGGATCAGGCAGTGATACAGATGCGGAAATGCCAAATATACTGAGTCTGCAAGTATTAGATGCTGTGAATGATGGTGAGGCAATTGACACAACGTCTTCTTCAAGGTTGGAGAAAACTTCGGACTTCTGCGGTACCATCAGCTCTGAGCTTAGTGGTGATGAGAAGAGCCATATGGGATTATTACAAGACAAAATGGCCTCACCTGCTGCCGGCATGGGCCAAGTGCACCACGGGGTCAATGGATCTGGAAATTATAATTCGGTTGTTAATGGTGATATTGGTACTGGAATCAGGATAAGGTCTCGCCAAGTACGGAAGGACATGCCAAACACAAACAACCACAATAGCCGAGGTACTGCACCCAGGAGAATCCGTCTGCAACGTAAACTTCAAGTGCACCCTCTTAGCTCCAATGAGGTGGTCGATAGTGGGAGCTGCATAACAGAGGACCACGATTCAAAGCCAAGCATTGCAGGGGAGAGAAAAGCTTCAGAAAATCACGCTGCTGATGTGGATGCTATCGAAGACGAATCCCAGAAGACATCTTCTGAGTTAACTGACATTACAAAGATTCCTGAGCAACATACTGAAAGCTTGTGCACAAGGGCCCTTTACACATCAGAAGCGTCCATCAAACTCAAAATTTGGTCATCTGTTGTACTTGTTGTCATTGTACTAGTCCTGTTAGTAGTCTTAGCTAACATATGGGGGCATTCTAGGAGTTGA 1800 0.4444 MGAAVECCPPRVDEVAVLPLNLLPLGFRFRPTDEELIDYYLRQKINGNGSDVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKDRRIKSGSNLIGMKKTLVFYTGRAPRGKRTNWVMHEYRPTLKELDGTNPGQSAYVLCRLFKKQDETLEGSNCEGNDRTVSTPTTANCSPEEIQSDAVPTDASPSLATEDDKNRAAPFCISDNSDEATSNIITPSDYNSKEYEICDVQNKIVIPTTEEEDQLLNLDIFYDPTTEPLDGKLFSPVHQHIPPEFCFTSSNELDNCGLQLQYGTNEVNMTEFLNSVVNWDELSCDSSSQMPTSTLVDAKDNGSGSDTDAEMPNILSLQVLDAVNDGEAIDTTSSSRLEKTSDFCGTISSELSGDEKSHMGLLQDKMASPAAGMGQVHHGVNGSGNYNSVVNGDIGTGIRIRSRQVRKDMPNTNNHNSRGTAPRRIRLQRKLQVHPLSSNEVVDSGSCITEDHDSKPSIAGERKASENHAADVDAIEDESQKTSSELTDITKIPEQHTESLCTRALYTSEASIKLKIWSSVVLVVIVLVLLVVLANIWGHSRS 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0142 599 MobiDBLite consensus disorder prediction 179 220 - -
Lele02g0142 599 Gene3D NAC domain 32 178 IPR036093 GO:0003677|GO:0006355
Lele02g0142 599 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 221 - -
Lele02g0142 599 MobiDBLite consensus disorder prediction 503 541 - -
Lele02g0142 599 MobiDBLite consensus disorder prediction 499 547 - -
Lele02g0142 599 Pfam No apical meristem (NAM) protein 24 149 IPR003441 GO:0003677|GO:0006355
Lele02g0142 599 MobiDBLite consensus disorder prediction 183 212 - -
Lele02g0142 599 FunFam Nac domain-containing protein 86 32 176 - -
Lele02g0142 599 SUPERFAMILY NAC domain 18 173 IPR036093 GO:0003677|GO:0006355
Lele02g0142 599 ProSiteProfiles NAC domain profile. 23 173 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0142 Lele-ChrLele02 803519 806828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0142 15 513 NAC Transcription Factor Family AT4G35580 40.157 7.41e-97 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele02g0142 NAM 3.5e-36 No_clan