Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0140 ATGCCCATTCTAACTTTTTGTCATTCTAAGTTGAGTCCTTCGGTAACTCTACAGTTACCTTGTAACTTCATGAGAAGAATGGGTTTGATTACGCAAATAAAGTGTTCTGTTGTTAATAGAACCCTGACTTCTAGCTCAGTGGCTTCACCCACACCCAAACCAGACTCCCCTCGCTTGAACAGGAAACAAGGGCGTTCATCTTCATTATATAGTCGTCCTAGTTTATCAGAAATGAACAAAGAGATGATGGCAAACCGTGAGAAAGTTTATGCATTCTTGCGGGGGATTGGCATTATTCCTGATGAGCTTGATGGCATGGAACTTCCAGTGACAGTCGAAGTTATGAGGGAACGGGTAGATTTTCTTCACAATCTAGGGCTTACAATTGAAGACATCAACAATTATCCATTAGTTCTTGGCTGCAGTGTCAAAAAGAATATGATTCCTGTGCTTGATTACCTTGGTAAATTGGGAGTCAGGAAATCTACATTTACGCAGTTCTTGCGGAGATACCCACAAGTTCTTCATGCTAGTGTTGTTATTGACCTTGAGCCAGTGGTCAAGTATCTTCAGGGGATGGATATCAAGCCTAATGATATTCCCCGGGTTCTTGAGACATATCCAGAAGTGCTAGGATTCAAGCTTGAGGGAACCATGAGCACATCAGTTGCTTATTTGGTTGGCATTGGTGTTGCAAGAAGAGAAATTGGAGGGGTTCTAACAAGATACCCTGAGATTTTGGGAATGAGAGTTGGTAGAGTAATCAAGCCTTTTGTGGAGTATCTGGAAGGCTTGGGAATTCCTAGATTAGCCCTTGCAAGAATAATAGAGAAGCGACCTTATATTCTTGGCTTTGGATTGGACGAGAAGGTGAAGCCAAATGTTGAAGCTCTTGAAGATTTCAATATTAGAAGAGCACATCTACCCTCTGTAATTGCACAGTATCCTGATATCATGGGAATGGACTTGAAGCCAAAGCTTGAGAATCAAAGTAATTTTCTTAAATCTTTACTTGATTTGGATTCTGAAGATTTTGGTAGAGTTGTTGAGAAGATGCCACAGGTAATTAGCCTCAGTAGTGCGCCTATGTTAAAGCATGTTAATTTTCTCAAGGATTGTGGGTTTTCCTTGCAAAAAATGAAGAAGATGATCGGTGGATGCCCTCAACTTCTCGCTTTAAACATTGACATCATGAAACTTAGCTTTGATTACTTTCAAAAGGAGATGGGGAGGCCCTTGGAAGACTTGGTTGATTTCCCAGCCTTCTTCACATATGGTCTGGAGTCAAGTGTAAAACCCAGGCATAAGATGGTTGCCAAGAAGGGAGTGAAGTGTTCCCTTGCATGGATGCTTAATTGCTCAGATGACAAGTTTGAGCAACGAATGGATTATGACACTATTGACATGGAGGAAATGGAAATGGGACCATCATTTGACATGAATTCTCTGATGGAACTAAGGAGTGACGAGTCAGCTTCTGATTATGATGACAGTGATGATGATGAGTAA 1509 0.4115 MPILTFCHSKLSPSVTLQLPCNFMRRMGLITQIKCSVVNRTLTSSSVASPTPKPDSPRLNRKQGRSSSLYSRPSLSEMNKEMMANREKVYAFLRGIGIIPDELDGMELPVTVEVMRERVDFLHNLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTQFLRRYPQVLHASVVIDLEPVVKYLQGMDIKPNDIPRVLETYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTRYPEILGMRVGRVIKPFVEYLEGLGIPRLALARIIEKRPYILGFGLDEKVKPNVEALEDFNIRRAHLPSVIAQYPDIMGMDLKPKLENQSNFLKSLLDLDSEDFGRVVEKMPQVISLSSAPMLKHVNFLKDCGFSLQKMKKMIGGCPQLLALNIDIMKLSFDYFQKEMGRPLEDLVDFPAFFTYGLESSVKPRHKMVAKKGVKCSLAWMLNCSDDKFEQRMDYDTIDMEEMEMGPSFDMNSLMELRSDESASDYDDSDDDE 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0140 502 SMART mt_12 346 376 IPR003690 GO:0003690|GO:0006355
Lele02g0140 502 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Lele02g0140 502 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Lele02g0140 502 SMART mt_12 413 444 IPR003690 GO:0003690|GO:0006355
Lele02g0140 502 SMART mt_12 237 268 IPR003690 GO:0003690|GO:0006355
Lele02g0140 502 SMART mt_12 66 99 IPR003690 GO:0003690|GO:0006355
Lele02g0140 502 SMART mt_12 201 232 IPR003690 GO:0003690|GO:0006355
Lele02g0140 502 SMART mt_12 309 341 IPR003690 GO:0003690|GO:0006355
Lele02g0140 502 SMART mt_12 381 412 IPR003690 GO:0003690|GO:0006355
Lele02g0140 502 SMART mt_12 165 196 IPR003690 GO:0003690|GO:0006355
Lele02g0140 502 FunFam Transcription termination factor mterf4, chloroplastic 115 252 - -
Lele02g0140 502 PANTHER CGI-12 PROTEIN-RELATED 150 268 IPR003690 GO:0003690|GO:0006355
Lele02g0140 502 FunFam Transcription termination factor MTERF4, chloroplastic 253 467 - -
Lele02g0140 502 MobiDBLite consensus disorder prediction 44 72 - -
Lele02g0140 502 Pfam mTERF 151 459 IPR003690 GO:0003690|GO:0006355
Lele02g0140 502 Gene3D Transcription termination factor 3, mitochondrial 253 468 IPR038538 -
Lele02g0140 502 Gene3D Transcription termination factor 3, mitochondrial 67 179 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0140 Lele-ChrLele02 795736 797244 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele02g0140 mTERF 6.9e-109 No_clan