Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0115 ATGGTTTCCTCGCAATTATCTGCCTTGATTGGGAATTGTTTGCAGAAGCCTTTCCTGAAGCAATTTCTTTTTCCAAGTGAATCATCTGATGTTTTGCCTCTTGGTTATGATGAGGTCGATTTTTCTGATGCGTTTGGTCCGTCTCCTGATGAAAATATACACAACATTCCTTCTGTAATTCACAGCCGATCCCATTCTTTTGTGGGGCCCACATCCTATATTAGTAGTCATTCCTTGAACGTTAACAAAATCAGCTTCCTTGAGAAGGAGGATGCACTGGAACAGGCGGAGGGGGTCAGCAGAGAAACCCGGGAAGAATTTAAGGAAGAGAAGTCTAATTTGAAACATAAAAGTGTTGTTGGCCTTGAAGATTTTGAAGTCCTGAAAGTTGTTGGGCAAGGTGCATTTGGGAAGGTGTACCAGGTGAGGAGGGGAGTGACATCTGATATTTATGCAATGAAGGTAATGCGGAAGGACAAGATCATGCAGAGAAACCACGCTGAATATGTGATATCTGAAAGGGATATATTAACAAAAGTTTATCACCCTTTTATTGTGCGACTCAGATACTCATTCCAGACAAAGTATAGGTTGTACCTTGTGCTTGATTTCGCGAATGGCGGCCACCTTTTCTTTCAGCTTTATCGCCAAGGCTTATTCAGGGAGGACCTGGCTCGCTTTTATGCTGCAGAGATTGTTTCAGCTGTCTCTCATCTTCATGTAAATGGCATAACGCACAGGGATATTAAACCTGAAAATATTCTTCTGGACGCTCATGGTCATATAGTTTTGACGGATTTTGGCCTGGCTAGGCAATTCTGTGAGAAGGCAAGGTCAAATTCCATGTGTGGAACTTTAGAATATATGGCCCCTGAAATTCTTCTGGGGAAAGGACATGATAAGGCAGCTGATTGGTGGAGCATTGGAGTTTTAATTTTTGAAATGATGACGGGGAAGCCTCCCTTTACCGGTGGAAATAGACAGAAGATCCAGAAAAAGATAATAAAGGACAAGGTCAAGCTTCCGGCTTTTTTGTCTAGTGAGGCACATTCACTGTTAAAAGGGTTGTTGCAGAAAGAAGCCAGCAAACGCCTTGGCAATGGACCAAGCGGCAGCGAGATGATTAAGAGCCACAAGTGGTTTAAGTCAATTAATTGGAAGAAACTAGAAGCTCGAGAAATCAGGCCTAGCTTTGTCCCAGAAGTTGTTGGGAATCATTGTGTTACTAACTTCGAGGATCGGTGGACTAATATGCCTTTGCTGGATTCTCCTGTTGTCACCCCCAAATTCAATGACAACCCCTTCAATGGGTTCGATTGGGCATTGTAG 1329 0.4304 MVSSQLSALIGNCLQKPFLKQFLFPSESSDVLPLGYDEVDFSDAFGPSPDENIHNIPSVIHSRSHSFVGPTSYISSHSLNVNKISFLEKEDALEQAEGVSRETREEFKEEKSNLKHKSVVGLEDFEVLKVVGQGAFGKVYQVRRGVTSDIYAMKVMRKDKIMQRNHAEYVISERDILTKVYHPFIVRLRYSFQTKYRLYLVLDFANGGHLFFQLYRQGLFREDLARFYAAEIVSAVSHLHVNGITHRDIKPENILLDAHGHIVLTDFGLARQFCEKARSNSMCGTLEYMAPEILLGKGHDKAADWWSIGVLIFEMMTGKPPFTGGNRQKIQKKIIKDKVKLPAFLSSEAHSLLKGLLQKEASKRLGNGPSGSEMIKSHKWFKSINWKKLEAREIRPSFVPEVVGNHCVTNFEDRWTNMPLLDSPVVTPKFNDNPFNGFDWAL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0115 442 FunFam Non-specific serine/threonine protein kinase 122 225 - -
Lele02g0115 442 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Lele02g0115 442 SMART serkin_6 125 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g0115 442 CDD STKc_AGC 131 381 IPR045270 GO:0004674|GO:0005524
Lele02g0115 442 Gene3D Phosphorylase Kinase; domain 1 122 421 - -
Lele02g0115 442 Pfam Protein kinase domain 125 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g0115 442 FunFam Non-specific serine/threonine protein kinase 205 400 - -
Lele02g0115 442 SMART pkinase_C_6 382 434 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele02g0115 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Lele02g0115 442 Gene3D Transferase(Phosphotransferase) domain 1 205 400 - -
Lele02g0115 442 ProSiteProfiles AGC-kinase C-terminal domain profile. 382 442 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele02g0115 442 SUPERFAMILY Protein kinase-like (PK-like) 122 431 IPR011009 -
Lele02g0115 442 Coils Coil 93 113 - -
Lele02g0115 442 ProSiteProfiles Protein kinase domain profile. 125 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g0115 442 PANTHER RIBOSOMAL PROTEIN S6 KINASE 100 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0115 Lele-ChrLele02 677509 679388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0115 1 440 AGC Kinase Gene Family AT3G08720 62.745 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Lele02g0115 Pkinase 9.8e-74 CL0016