Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0109 ATGGCGAACCCCAGAAATCTAAAAGAGCCAGAAACCATGGAAGATGCCACTGGTTCTTTAATAGAACGTGCTTGTGAATTAGCCAAACACCTGGAATCAAATTTTCCCAACTTGGCTAACCAACCCGATACACTGTTCACGTCCATTGATGAGATAGTGAAGACGTTCTTGGCCGCAAAAGAAAACCTACGAATGTTTTCCCAGCACCAAACGCCACCTTCTTCCTTTTCTCATCAGTCGATCGGATCTACCAGTCATGCACAGCCAATGGATCAGTCGATTACTGATCAGATGCAACGACCACGATCAGCTCAAATGCGACCGGGAAAGAGGAAAAGTGATACGGAGACGAAGACGGTGATGGCACCGGCGCCTAGGTTTGGGAACACAGAGATTCCCCCAGAAGATGGTTTCACTTGGCGAAAGAGTTATTACAGGTGCACCCACCAGAAATTATATAAATGTCCGGCGAAGAAGCAAGTACAGCGACTTGATAACAACCCTAACACATTCGAAGTAACATACCGAGGCAGTCACAGCTGCATCATGTCCTCCACGGCTCCATCCTCAGTTCCACCTCCACAACTTTTCGCCGACTTCAACACCACCGTTTCGCCTCAGCTGTCTTCTTCTTCAACTCCAGTTTGCCAGTGGCTCCCGTCGCTCCACCTCGACCTCTGCACCGCCGCTCCCACTGGTGTGGATGCCGGTACTGCCAGTAGAGGCCCCTCCACTTCGAGATACGGTGGTGGTAGTACGAATTATATGGTGGCAGATATAGCTGATGCTATATTGAATTCTAGTAGGAGTAGCGCCATCGAATCCTTCTTCCCGTTTCCTGAAGATAAATGGCAACATGGTGACTAG 867 0.4913 MANPRNLKEPETMEDATGSLIERACELAKHLESNFPNLANQPDTLFTSIDEIVKTFLAAKENLRMFSQHQTPPSSFSHQSIGSTSHAQPMDQSITDQMQRPRSAQMRPGKRKSDTETKTVMAPAPRFGNTEIPPEDGFTWRKSYYRCTHQKLYKCPAKKQVQRLDNNPNTFEVTYRGSHSCIMSSTAPSSVPPPQLFADFNTTVSPQLSSSSTPVCQWLPSLHLDLCTAAPTGVDAGTASRGPSTSRYGGGSTNYMVADIADAILNSSRSSAIESFFPFPEDKWQHGD 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0109 288 SUPERFAMILY WRKY DNA-binding domain 132 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g0109 288 ProSiteProfiles WRKY domain profile. 137 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g0109 288 SMART WRKY_cls 134 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g0109 288 Gene3D WRKY domain 126 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g0109 288 Pfam WRKY DNA -binding domain 141 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g0109 288 MobiDBLite consensus disorder prediction 68 102 - -
Lele02g0109 288 MobiDBLite consensus disorder prediction 68 133 - -
Lele02g0109 288 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 190 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0109 Lele-ChrLele02 625787 627667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0109 13 190 WRKY Transcription Factor Family AT2G40740 38.889 1.42e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele02g0109 WRKY 1.3e-11 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0109 02 625787 627667 Lele03g0111 03 624550 626460 hybridization
Lele02g0109 02 625787 627667 Lele04g0107 04 628409 630421 hybridization