Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele02g0104 | ATGTCTCTTCATCAACGTGCTCGCCGTCTTCTGCTGGACCATGAATCAAGCCCAACCCCACCAGATAGCATATACAGGTCAAGGATGACTTATACAAGTGACGCTAATTTTGACACCAACATGGTGATTATATTAGCAGCCTTGCTCTGTGCTCTTATATGCGCTTTGGGTCTGAATTCAATAGCACGATGCGCCGTCAGATGCAGCCGAAGGTTGGCTTTTGAGACGGCAGAGGAGGCGGCAGCTCGTTTAACTGCGAAAGGGATGAAGAAGAGCGCGTTGCGTCAGATACCTATAGCCGTGTGTGGTTCATCAGGGGCTGAAATTGCAGGCACAGATTGTCCGATTTGCTTAGGGGAGTTCGTGGACGGAGAGAAAGTGAGGGTGCTTCCAAAATGCAACCACGGATTCCATGTAAAGTGCATAGACACGTGGCTGCTTTCTCATTCGTCTTGCCCGACTTGCAGGCAGTCTCTTCACGAACCCTCCAATTCTCAGGCAGTATATGTACCTGCAGCTGATCAGGCTGTCTAA | 534 | 0.4981 | MSLHQRARRLLLDHESSPTPPDSIYRSRMTYTSDANFDTNMVIILAALLCALICALGLNSIARCAVRCSRRLAFETAEEAAARLTAKGMKKSALRQIPIAVCGSSGAEIAGTDCPICLGEFVDGEKVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLHEPSNSQAVYVPAADQAV | 177 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele02g0104 | 177 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 74 | 162 | IPR013083 | - | |
Lele02g0104 | 177 | CDD | RING-H2_PA-TM-RING | 113 | 156 | - | - | |
Lele02g0104 | 177 | ProSiteProfiles | Zinc finger RING-type profile. | 114 | 156 | IPR001841 | - | |
Lele02g0104 | 177 | SMART | FANCL_C_2 | 110 | 173 | - | - | |
Lele02g0104 | 177 | Pfam | Ring finger domain | 113 | 156 | IPR001841 | - | |
Lele02g0104 | 177 | SMART | ring_2 | 114 | 155 | IPR001841 | - | |
Lele02g0104 | 177 | PANTHER | RING-H2 FINGER PROTEIN ATL78 | 7 | 166 | IPR044602 | GO:0016567|GO:0016740 | |
Lele02g0104 | 177 | SUPERFAMILY | RING/U-box | 107 | 166 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele02g0104 | Lele-ChrLele02 | 604439 | 604972 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele02g0104 | 9 | 163 | C3H Transcription Factor Family | AT3G10910 | 55.556 | 9.94e-56 | 172 |