Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0101 ATGGGTGAGGGAGGACGATTTCAGCTGGGAACTGTCGGGGCCCTGTCTCTGTCTGTGGTATCATCAGTGTCATTTGTAATTTGCAATAAGGTACTAATGAGCTCATTAAATTTCAATTTCGCTACAACTTTGACAAGCTGGCATCTTCTTGTCACATATTGTTCTCTTCATATGGCACTAAAAATGAGATTCTTTGAGCACAAATCTTTTGAGCAGAAAGCCGTTACGGGATTTGGGATTCTAAATGGAATTTCAATTGGACTTCTAAACTTGAGCCTGGGGTTCAATTCTGTGGGCTTCTACAAGTTTTCCCTTTGTATCCTCCTTCTTGGTGTTGGTATTGCAACAGTCACTGATTTGCAGCTCAATGCTCTGGGCTTTCTTAACTCTTCTGGCAGTGATTGCGACATGCCTTGCTCAGATTTGAATTTTAGCACATTTCTGGTGATTGGGAAGACATCTCCGGTGACCTATCAGGTTCTGGGACACCTAAAGACATGCCTTGTATTGGCGTTTGGTTATATCTTACTCCGAAATCCAATCAGCTGGTGGAACGTCCTTGGGATTTTGATAGCCTTGATTGGCATGATTCTCTATTCTTACTATTGCAATCTCGAGAATCAGCAAAAAGCTGCTGAAGCTGCAGCCCTAGCATCAGCCCAGACGAAGACAAAAACTTCCTTCTCTTCCTACACTATCACGCCTGGAATTCGGAACGATTCAAAATCGAATTTCTGCTCTCCAATAGCTTTTGGATTTGCTGCTGGAGCAAAGACAAAGATGGGTGAGGGAGAACGATTTCAGCTGGGAACTATCGGGGCGTTGACACTATCTGTGGTGTCATCAGTGTCGATTGTAATTTGTAATAAGGCGCTAATGAGCTCACTGCACTTCATTTTTGCTACAACTTTGACAAGCTGGCATCTGCTTGTCACATTTTGTTCTCTTCACGTGGCACTAAAAATGAGATTCTTTGAGCGCAAACCTTTTGAGCAGAAAGCTGTAATGGGATTTGGGATTCTTAATGGAATCTCAATTGGACTTTTAAATTTGAGCCTGGGGTTCAATTCTGTTGGCTTTTATCAGATGACCAAGTTGGCTATTATTCCGTTCACTATTCTGTTGGAGACCCTTTTCCTGGGGAAGAGATTCAGTAAAAGAATTCAACTTTCCCTGGTTATCCTCCTTCTAGGTGTTGGGATTGCAACAGTCACTGATTTGCAGCTCAATGCTTTGGGCTCTTTCCTATCTCTTCTTGCAGTGATTACAACATGTGTTGCTCAGATTATGACAAATACCATCCAGAAGAATTACAAGGTTTCGTCCACCCAGTTGCTGTACCAATCATGTCCATATCAAGCAGCCACTTTATTGATCTCTGGTCCTTATCTGGACAAACTTTTGACCAACCGAAATGTATTTGCTTTCGAGTACACCACACAAGTGATGTTTTTCATCATTCTTTCGTGCCTCATCTCCATCTCTGTAAATTTTAGTACCTTTCTCGTGATTGGAAGGACGTCTCCAGTCACTTATCAGGTTCTTGGACACTTGAAGACATGCCTTGTATTGGCATTTGGCTATATTTTGCTTCATGATCCATTCAACTGGAGGAACATCCTGGGGATTTTGATAGCCCTGATGGGGATGATTTTGTATTCGTACTGTTGCACTCTAGAGAATCAGCAAAAAGCTGCAGAAGCTGCAGCAGAAGCGTCCCAGGCAAGAGAAGGCGATTCAGAAGCTCTGCTGAATGTGGAAAATGGAAGTGCGGCATTGAGTAATTCTGTTGGACAAGAGGGCGGTGCGTGGGGCAAAGACAAGACTTTTAAGAGAAGGAATGGGGGTCGCAACAAGCATGGCCGTGGACACGTTAAATTCATTCGCTGCTCCAACTGTGGCAAATGTTGCCCCAAAGACAAGTCAATTAAAAGGTTTCTTGTGAGGAACATTGTTGAGCAAGCTGCTGTTAGGGATGTCCAGGAAGCCTGTGTATATGAGCAATACACCCTTCCCAAGCTGTATGTTAAGATGCAATATTGTGTGTCCTGCGCAATTCACTCCCATGTTGTGAGGGTTCGATCTCGCACAGATAGGAGGAACCGTGAACCCCCACAGCGCTTCATCAGGCGCAGGGATGATCAACCAAGGCCCGGTCAGCCAGGGCAAGCACCTCGTCCTGCTGGAGTAGGAGCTCCTGCCCGTGCCTAA 2211 0.4446 MGEGGRFQLGTVGALSLSVVSSVSFVICNKVLMSSLNFNFATTLTSWHLLVTYCSLHMALKMRFFEHKSFEQKAVTGFGILNGISIGLLNLSLGFNSVGFYKFSLCILLLGVGIATVTDLQLNALGFLNSSGSDCDMPCSDLNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILLRNPISWWNVLGILIALIGMILYSYYCNLENQQKAAEAAALASAQTKTKTSFSSYTITPGIRNDSKSNFCSPIAFGFAAGAKTKMGEGERFQLGTIGALTLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALKMRFFERKPFEQKAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTILLETLFLGKRFSKRIQLSLVILLLGVGIATVTDLQLNALGSFLSLLAVITTCVAQIMTNTIQKNYKVSSTQLLYQSCPYQAATLLISGPYLDKLLTNRNVFAFEYTTQVMFFIILSCLISISVNFSTFLVIGRTSPVTYQVLGHLKTCLVLAFGYILLHDPFNWRNILGILIALMGMILYSYCCTLENQQKAAEAAAEASQAREGDSEALLNVENGSAALSNSVGQEGGAWGKDKTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFIRRRDDQPRPGQPGQAPRPAGVGAPARA 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0101 736 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 200 - -
Lele02g0101 736 SUPERFAMILY Multidrug resistance efflux transporter EmrE 479 554 - -
Lele02g0101 736 MobiDBLite consensus disorder prediction 694 736 - -
Lele02g0101 736 MobiDBLite consensus disorder prediction 696 717 - -
Lele02g0101 736 FunFam 40S ribosomal protein S26 608 721 - -
Lele02g0101 736 Pfam Ribosomal protein S26e 609 713 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele02g0101 736 ProSitePatterns Ribosomal protein S26e signature. 680 687 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele02g0101 736 Gene3D Ribosomal protein S26e 608 721 IPR038551 -
Lele02g0101 736 SUPERFAMILY Multidrug resistance efflux transporter EmrE 309 404 - -
Lele02g0101 736 Pfam Triose-phosphate Transporter family 281 554 IPR004853 -
Lele02g0101 736 Pfam Triose-phosphate Transporter family 145 200 IPR004853 -
Lele02g0101 736 PANTHER SOLUTE CARRIER FAMILY 35 142 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0101 Lele-ChrLele02 579392 589137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0101 609 723 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.478 3.98e-70 223