Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0078 ATGGCTGGCAATTCCCCTTGCGCTTCATGCAAATTGCTCAGACGCCGATGCGCCAGAAACTGCATTTTCGCTCCCTATTTCCCTTCCGATGATCCCCAAAATTTCGCCATTGTTCACAAGGTTTTTGGCGCCAGCAACGTCAGCAAAATGTTACAGGAACTTCCGGTGCACCAGAGAGCTGATGCGGTGAGCAGCCTAGTGTATGAGGCAAATGCGAGAGTGAGAGACCCAGTTTATGGTTGTGTCGGGGCCATATCGTACCTGCAAAACCAGGTGTCGCAGCTCCAAATGCAGCTTGCGGTGGCTCAGGCAGAGATACTCTGCATCCAGATGCAGGGTGATCCGGTGATGCTGCCAAGCCCAGAAATGGATCACCCCAAATCTTACTTTCTCCAAAATGACCTTCCTCACTATCTCAATCTCACTTCTTCTGGCAATGTAATTCATCGCGATCACTCTCTCAAGAGAGAGAGCATCTTCGGGCAGGACATGGTTTCTTGA 501 0.505 MAGNSPCASCKLLRRRCARNCIFAPYFPSDDPQNFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQGDPVMLPSPEMDHPKSYFLQNDLPHYLNLTSSGNVIHRDHSLKRESIFGQDMVS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0078 166 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Lele02g0078 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 125 - -
Lele02g0078 166 Coils Coil 85 105 - -
Lele02g0078 166 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0078 Lele-ChrLele02 458812 459414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0078 3 117 AS2 family AT2G30130 89.565 4.51e-74 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele02g0078 LOB 9.6e-43 No_clan