Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0068 ATGGAGGACTTTTCTTCCTCGCCCCCTCATGTGCTTCACCCTCCCCAAGAAACCGCACCCGCCACCGTCGCCACCGTTGCCACCGCCACTCCCTGCCCAACATCTTCTAATACCTCCAAAACTGACTCTGCTCGCAAATGTAAAGGCAAGGGTGGTCCCGACAACAACAAATTTAGGTACCGTGGTGTGAGGCAACGAAGCTGGGGCAAATGGGTGGCTGAGATCCGAGAGCCTCGCAAGCGAACCCGAAAGTGGCTCGGCACCTTCGCCACCGCCGAGGACGCCGCTCGAGCCTACGACCGCGCCGCTATCATCCTCTACGGCTCTAGGGCCCAGCTCAATTTACAACCCTCCGCCGCCTCTTCTTCCCACTCTTCCTCCTCTCGGGCCTCTACCCCTTCTTCCTCTTCTCAAACCCTTCGTCCCTTGCTTCCCCGCCCCTATGGCCTTAGCTTCGCCTTTTCTTCTGCCGCCACATCGGGTTTATTGCCCTACGGGGTTTACTCCGCCAATAATACCAATACTGATTATATCCCGCAAATGATGTGTCCGGTGAATAATAATACGGTGCAACAACATCATCAAGTGGTGCAACTTCCACAGAAACTGTGTCAGTTCCCAGAATCTGCTAGAAATATTGTCGACAACTCCAACATAGCAACCTCGTACCAGGATCAGCTGCTGCTGCAGCAGCCGCAGTCGAATCAACGGCAGCATCATAATTGCATGCACGAAGATATTAGTTCTCTGGTGAGTTCGATTGGGTCAAGTTCGCAGGCACAGACTGTGGTTGCACCTGCGGATCCGTGGCCGTTGTCGAATGAGGAAGAGTACCCACCAAGTCTATGGGACTACTATAACGATCCTTTCCTCTTTGATTTTTAA 885 0.5345 MEDFSSSPPHVLHPPQETAPATVATVATATPCPTSSNTSKTDSARKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPSAASSSHSSSSRASTPSSSSQTLRPLLPRPYGLSFAFSSAATSGLLPYGVYSANNTNTDYIPQMMCPVNNNTVQQHHQVVQLPQKLCQFPESARNIVDNSNIATSYQDQLLLQQPQSNQRQHHNCMHEDISSLVSSIGSSSQAQTVVAPADPWPLSNEEEYPPSLWDYYNDPFLFDF 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0068 294 MobiDBLite consensus disorder prediction 43 59 - -
Lele02g0068 294 FunFam Ethylene-responsive transcription factor 2 59 117 - -
Lele02g0068 294 MobiDBLite consensus disorder prediction 1 59 - -
Lele02g0068 294 MobiDBLite consensus disorder prediction 21 42 - -
Lele02g0068 294 Pfam AP2 domain 59 107 IPR001471 GO:0003700|GO:0006355
Lele02g0068 294 CDD AP2 59 116 IPR001471 GO:0003700|GO:0006355
Lele02g0068 294 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Lele02g0068 294 PRINTS Ethylene responsive element binding protein signature 82 98 IPR001471 GO:0003700|GO:0006355
Lele02g0068 294 SMART rav1_2 59 122 IPR001471 GO:0003700|GO:0006355
Lele02g0068 294 Gene3D AP2/ERF domain 58 116 IPR036955 GO:0003700|GO:0006355
Lele02g0068 294 ProSiteProfiles AP2/ERF domain profile. 59 116 IPR001471 GO:0003700|GO:0006355
Lele02g0068 294 MobiDBLite consensus disorder prediction 118 142 - -
Lele02g0068 294 SUPERFAMILY DNA-binding domain 59 117 IPR016177 GO:0003677
Lele02g0068 294 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 33 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0068 Lele-ChrLele02 417850 418734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0068 45 294 AP2-EREBP Transcription Factor Family AT2G40220 46.075 4.50e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele02g0068 AP2 9.9e-13 CL0081