Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0067 ATGACAAGCCAAGATTCCCAGGGTTTTACATGGCACTACACGGAGCTGGATGACCGAAATCTCGAAATCCGCGGCCGAACGTTTTTCTTCGCGGTCGTGCTGTTCTCCATTCTCCTTATTCTGGCCCTTCTCTTCCTTTATGCTCGCTGGATCTGGAGGTACCGGGGCCAGCATCCCACCACCTACCATTCCAACGGACCGCCCCTCGCGCCGCCGCCTCCTACTCCGCCACAGGGCCTCGACCCCGCTTCAATCAAGAAATTGCCTATAGTTTTGCACCAAAGGACTTGGGATGCCAACAGTAAATTGGAGGAAACCGAGTGCTGTATTTGCCTCGGGACGTTCAAAGATGGCGAGAAATTGAAGATTTTGCCCGGCTGTGACCATAGCTTCCACTGTGAATGTGTTGATAAGTGGCTTTTCAATCACTCTAGTTGTCCTATCTGCAGATCTTCTCTCAAGGTTCATTCTTCCTTTCCCAAGATCTTGATTCAAGAACCACCCAATCGGATCAATCTTCCCCTGTAG 528 0.5095 MTSQDSQGFTWHYTELDDRNLEIRGRTFFFAVVLFSILLILALLFLYARWIWRYRGQHPTTYHSNGPPLAPPPPTPPQGLDPASIKKLPIVLHQRTWDANSKLEETECCICLGTFKDGEKLKILPGCDHSFHCECVDKWLFNHSSCPICRSSLKVHSSFPKILIQEPPNRINLPL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0067 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 156 IPR013083 -
Lele02g0067 175 SUPERFAMILY RING/U-box 100 157 - -
Lele02g0067 175 FunFam RING-H2 finger protein ATL66 72 155 - -
Lele02g0067 175 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 27 156 - -
Lele02g0067 175 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Lele02g0067 175 Pfam Ring finger domain 107 150 IPR001841 -
Lele02g0067 175 SMART ring_2 108 149 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0067 Lele-ChrLele02 407155 407682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0067 4 158 C3H Transcription Factor Family AT3G11110 45.161 5.91e-37 123