Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0061 ATGGGACCGAAAGAGCGTCGAAGAAAAGTCACGCTTTCCTTCCTTCTTCCTCCTCCTTGGACTGAGTGGGAACACCACATAAAAGGGGCAACCCACTCCTCTTCGTTCTTCAACTTCTCCATCGAGGCCTTCTCGATTTTCCTCTCCAAGCCATTCACCCCACTCACTCCTGTACTACTCTATACTGTTCAATTTTCAAAGAACCCGGGCATGTGCAGTTGTTCAAGAAGTAAGCTTTCTCCCTCCAACGGCACCATGGAAAGTGAATCTCAAAAGGGGAACTCCTTCAACTCTTTGGTTTTGCTTGAACTCTCAGCATCCGATGATCTTGAAGCTTTCAGAAAAGAAGTGGAGAAGGGCTGCGACATCAACGTTGCAAGCTTTTGGTATGGTAGAAGAATTGGATCGAAGAAGATGGGTTGGGAGAAGAGGACAGCCCTCATGATCGCGTCTTTATTTGGAAGCCCTCGAGTGTTGAAGTACATAATTGAGACCGGAATGATTGATGTGAACAAAACCTGTGGTTCTGAAAGTGCCACGGCTCTCCATTGTGCTGTTGCTGGTGGCTCTCACTCTTCACTCGAGATTGTTCATCTCTTGCTTGATGCTGGGGCCGATGCTGATTGCATCGATGCTAGCGGAAATAAGCCTATCAACTTAATTGCCCCTGCCTTTAATTCCTTCTCCAACGCAAGAAGAAAGGCCATAGAGTTGTTGCTCGGAGGTGGGAAAGGAGGTCAAATCATCAATCAGGGAATGGAGCAACAAAAAATTGCAGTGCCTACTCTGTCCTCAAAAGAAGGAACTGAGAGAAAAGAATATCCTGTTGATGTATCATTGCCTGACATAAACAGTGGTATATATGGAACGGACGAGTTCAGAATGTACAGTTTCAAGGTGAAGCCGTGTTCAAGGGCTTACTCGCATGACTGGACCGAGTGTCCGTTTGTTCATCCTGGGGAGAATGCCAGGAGGAGGGACCCACGTAAGTACCCTTACAGCTGCGTTCCCTGCCCTGAGTTTCGCAAGGGCACATGCCAGAAGGGAGATGCTTGTGACTATGCACACGGTGTTTTCGAGTCCTGGCTCCATCCTGCTCAATACAGAACAAAGCTTTGCAAGGATGAGATTGGATGCGCTAGGAAAGTTTGTTTCTTTGCTCACAAGCCTGAAGAGTTGCGCCCTGTGTATGCTTCTACTGGTTCTGCTGTGCCTTCTCCAAAGTCCTTGGCTAGTGTACTTGATATGACATCAGTGAGTCCATTGGCTCTTAGTTCCTCATCTTTGCCCATGCCGGCTGTTTCAACTGCGCCTATATCTCCCCTTGCAGCTTCATCACCTCCTAAGAGTGGGGGCTTGTGGCAGAACAAAAGAAACCTCACTCCACCATCATTGCAGCTCCCTGGGAGCCGGCTGAAGGCTACCCTGAGTGCTAGGGATTATGGTCTGGATATGGAACTGCTTGGACTAGAAAGTCCTGCAAACCAGCATCAGCAGCAATTGATAGAAGAATGGGCTCGAATGTCCTCCCCGTCGCTGCGGAACAAAGACTTCAGTAGGTTTGGTGATTTGAACCCAACAAACCTTGATGACCTCCTGGGGTCCGTTGATCATTTTGTATCACCTCAATTACATGGCCTTTCAGCGCCTAGGCAATTGAACTCTCCAAGTGGGCTCCAAATGTGCCAAAACATGAACCCTCTTCGTGCAAGCTATCCAACTAACATGTCTTCCTCTCAAGTGAGGAAATCCTCTGCATTTGGGTTTGACTCATCAGCTGCTGTGGCGGCAGCAGTGATGAATTCCAGGTCTGCTGCCTTTGCAAAGAGAAGCCAGAGTTTTATTGATCGCGGTGAGTCAGTGAGCCACAATCTTGGACTTTCTTCACCTTCCCACCCCTCCTGTAGGGCGTCCTCTGCTCTTTCGGATTGGAGTTCTCCTGATGGGAAATTGGATTGGGGCATGAATGGGCATGAGATGCATATGCTGAAGAAATCTGCTTCATTCGGGTTCAGGAATAATGGGGTGTCTGCCACCTCCATGACTCCATCAGAACACGGTGAACCAGATGTGTCCTGGGTTCATTCGTTGGTTAAAGATGTGCCGTCGGAAGAGTTGTGTTGCTGA 2127 0.4852 MGPKERRRKVTLSFLLPPPWTEWEHHIKGATHSSSFFNFSIEAFSIFLSKPFTPLTPVLLYTVQFSKNPGMCSCSRSKLSPSNGTMESESQKGNSFNSLVLLELSASDDLEAFRKEVEKGCDINVASFWYGRRIGSKKMGWEKRTALMIASLFGSPRVLKYIIETGMIDVNKTCGSESATALHCAVAGGSHSSLEIVHLLLDAGADADCIDASGNKPINLIAPAFNSFSNARRKAIELLLGGGKGGQIINQGMEQQKIAVPTLSSKEGTERKEYPVDVSLPDINSGIYGTDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGTCQKGDACDYAHGVFESWLHPAQYRTKLCKDEIGCARKVCFFAHKPEELRPVYASTGSAVPSPKSLASVLDMTSVSPLALSSSSLPMPAVSTAPISPLAASSPPKSGGLWQNKRNLTPPSLQLPGSRLKATLSARDYGLDMELLGLESPANQHQQQLIEEWARMSSPSLRNKDFSRFGDLNPTNLDDLLGSVDHFVSPQLHGLSAPRQLNSPSGLQMCQNMNPLRASYPTNMSSSQVRKSSAFGFDSSAAVAAAVMNSRSAAFAKRSQSFIDRGESVSHNLGLSSPSHPSCRASSALSDWSSPDGKLDWGMNGHEMHMLKKSASFGFRNNGVSATSMTPSEHGEPDVSWVHSLVKDVPSEELCC 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0061 708 MobiDBLite consensus disorder prediction 625 645 - -
Lele02g0061 708 ProSiteProfiles Ankyrin repeat profile. 177 212 IPR002110 GO:0005515
Lele02g0061 708 Gene3D - 334 395 - -
Lele02g0061 708 ProSiteProfiles Ankyrin repeat region circular profile. 177 211 - -
Lele02g0061 708 SMART c3hfinal6 367 390 IPR000571 GO:0046872
Lele02g0061 708 SMART c3hfinal6 332 358 IPR000571 GO:0046872
Lele02g0061 708 Gene3D - 73 268 IPR036770 -
Lele02g0061 708 FunFam Zinc finger CCCH domain-containing protein 66 290 358 - -
Lele02g0061 708 Pfam Ankyrin repeats (3 copies) 112 209 IPR002110 GO:0005515
Lele02g0061 708 PANTHER UNKEMPT FAMILY MEMBER 103 701 IPR045234 -
Lele02g0061 708 SUPERFAMILY Ankyrin repeat 94 221 IPR036770 -
Lele02g0061 708 ProSiteProfiles Zinc finger C3H1-type profile. 332 359 IPR000571 GO:0046872
Lele02g0061 708 SMART ANK_2a 177 209 IPR002110 GO:0005515
Lele02g0061 708 SMART ANK_2a 142 172 IPR002110 GO:0005515
Lele02g0061 708 MobiDBLite consensus disorder prediction 440 468 - -
Lele02g0061 708 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 337 357 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0061 Lele-ChrLele02 369463 372148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0061 100 700 C2H2 Transcription Factor Family AT5G12850 39.757 6.86e-132 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele02g0061 Ank_2 4.4e-07 CL0465