Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0053 ATGGGCGGAAGCGCAGCGTTTTTGACCCAACAATCAGGTTTAGTTGCGGCTTGGCAAGTGGATATTCTGTGCTCTCCTGTGAAGTTGGAGGATACACCTTCCCTACATGAAAAATGCTTGAAGGAAGCATTAGTTGGCCTTTTAGACTATAGGTGGCGTTTTGAAATGATAAATAAGATGCAGCAGAATGATCAACTTTTGGTCGAGGGACGGAAAACAGGGGAAGAGGACGTCCTGATGGCAAAATACTATGACATTGATGACATCATCACAGAGGAAGAGATTGTGTCAGTTATATTCCAAAAGGCGGCATCAGGTGTGGGAATAGATCCCAGTTCTGAAACTGACTATATTGAAACAGGTTCCAAAGTGGAGATGCCTTTCTGGCTTGCTCATGAGCTACAATTGAGACAAGTAGCATCTATCAATGTTCCCTCTTGTTTTGATCAAAAAACAAGACTCGAGATTCAGGCTGATTGTGCTAGTGTGGATCTGAGGTCTCGATGTCCATTCTTTTACGAATTTGGATGCAAGATAGCACCCGTGGTTGGGGATCGGACCATTGGGTTTCTTCTCTTGTCTGCATTTAAGAATAGGTACAAGGAAATCCTCACCAAGGCACATTCTGCAGCATTTTCAGCTGCTTCAAAATTCTGTTCAATTTTAACAAAAGAAGAGATCAATTCTCAATCCTCTATGGCGTCCTTCAAGAAGTGGCGAATGGGGGGACCCCGATTTCAGAAAGCCTCTGTTCTTGGAAGAAAGAGGAAATCCACTGAATAG 783 0.4342 MGGSAAFLTQQSGLVAAWQVDILCSPVKLEDTPSLHEKCLKEALVGLLDYRWRFEMINKMQQNDQLLVEGRKTGEEDVLMAKYYDIDDIITEEEIVSVIFQKAASGVGIDPSSETDYIETGSKVEMPFWLAHELQLRQVASINVPSCFDQKTRLEIQADCASVDLRSRCPFFYEFGCKIAPVVGDRTIGFLLLSAFKNRYKEILTKAHSAAFSAASKFCSILTKEEINSQSSMASFKKWRMGGPRFQKASVLGRKRKSTE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0053 260 PANTHER UNCHARACTERIZED 80 259 IPR010492 -
Lele02g0053 260 SUPERFAMILY PriA/YqbF domain 79 145 - -
Lele02g0053 260 Pfam GINS complex protein 124 227 IPR021151 -
Lele02g0053 260 SUPERFAMILY GINS helical bundle-like 144 241 IPR036224 -
Lele02g0053 260 Gene3D - 73 242 IPR038437 -
Lele02g0053 260 CDD GINS_A_psf3 141 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0053 Lele-ChrLele02 309098 316168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0053 80 259 Core DNA Replication Machinery Family AT3G55490 67.935 3.02e-92 268