Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0047 ATGGCCTCATGCTACCGAGATCGTACGTCGGAGTTCCGATCTCTTTCTCAAACTCTGAAGAAGATTGAGGGAATCCCATTGCCTAATCAAGCTGAAGATGTTCCTTCCACATCGAAACAATATAATCCCGTGTCCTATTCTAGATCTGAATTCAACAGAAAGGCCTCTCGAATCGGGTTGGGTATCCATGAAGCCTCCCAGAAGATTTCGAGGCTTGCTCAATTGGCAAAGAAGTCATCAATGTTCAATGATCCCACGGTGGAAATACAAGAATTAACGGCTTTGATTAAGAATGACATCACGTCATTGAAGTCAGCTCTTTCAGATTTACAAACTATTCAAAACATGGAAATAGCTGATGGAAATTACTCGGACGATAGAATTGTTCATTCAACAGCTGTTTGTGATGACTTAAAGGGCAAACTTATGGGGGCGACTAAGCAGCTTCAGGATGTGTTAACTACTAGGACAGAGAATATCAAGGCTCATGAGAATAGGAAGCAGATATTTTCCAAGAAAGCATCTGGGGACAATCCTTTCCAGCATCGACCAAAGCCAGTGACCGAGCCACCCCCTTGGTCAAATTCATTAAATGCATCTGAAAGTTCACGGCAAACATCAGCATCCCTTTCAAATGAAGTTACACCGACCAATCAATTAAGACGGAGGCTAGCTGCTGACAACACTCCATCCCAGCAAATGGAACTGTCTAGGATGCAGCAAGTTGTCCCAAGACAGGAAAGTTATAGTCAGAGTCGTGCTACTGCTCTTCACAGTGTGGAATCTACTATCACAGAACTTAGTGGGATCTTCACTCATTTGGCCACAATGGTTGCTCATCAAGGGGAATTAGCTATCAGGATTGACGACAACATGGATGAGTCATTGGCAAATGTTGAAGGAGCTCACAGTTCTTTATTGAAGCATCTCAGCAAGATATCATCGAATAGGTGGCTTCTAATAAAGATATTTGCCATTCTGATACTTTTTCTGCTGATCTTCATATTCTTCTTAATTGCATATTGCGAGAAGCCTCAGGTTATTTTAATATCGATCGATTATAACTTTTCGGCGAGACGTACTGAGACTGCTGTGTCAGATATCTTTACTGTATCGCAGGCAGAGAACAAAGCACGTGCCAACCAAAGCTGA 1152 0.4245 MASCYRDRTSEFRSLSQTLKKIEGIPLPNQAEDVPSTSKQYNPVSYSRSEFNRKASRIGLGIHEASQKISRLAQLAKKSSMFNDPTVEIQELTALIKNDITSLKSALSDLQTIQNMEIADGNYSDDRIVHSTAVCDDLKGKLMGATKQLQDVLTTRTENIKAHENRKQIFSKKASGDNPFQHRPKPVTEPPPWSNSLNASESSRQTSASLSNEVTPTNQLRRRLAADNTPSQQMELSRMQQVVPRQESYSQSRATALHSVESTITELSGIFTHLATMVAHQGELAIRIDDNMDESLANVEGAHSSLLKHLSKISSNRWLLIKIFAILILFLLIFIFFLIAYCEKPQVILISIDYNFSARRTETAVSDIFTVSQAENKARANQS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0047 383 MobiDBLite consensus disorder prediction 192 220 - -
Lele02g0047 383 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 247 309 IPR000727 -
Lele02g0047 383 Gene3D - 46 302 - -
Lele02g0047 383 SMART tSNARE_6 242 309 IPR000727 -
Lele02g0047 383 Pfam SNARE domain 284 335 IPR000727 -
Lele02g0047 383 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 6 21 IPR021538 -
Lele02g0047 383 MobiDBLite consensus disorder prediction 159 220 - -
Lele02g0047 383 CDD SNARE_syntaxin5 250 322 - -
Lele02g0047 383 PANTHER SYNTAXIN 49 334 IPR045242 -
Lele02g0047 383 ProSitePatterns Syntaxin / epimorphin family signature. 253 292 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lele02g0047 383 SUPERFAMILY t-snare proteins 47 302 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0047 Lele-ChrLele02 283139 286276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0047 1 338 SNARE and Associated Proteins AT5G05760 67.552 3.13e-153 434