Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0028 ATGACTGGGGGAGACTGTGCCGGCTCTGCCTCTCCCTCTCCCTCCCTCGCATTCCCAAACAATCGCGCCGCCGATTCGGAAGTCGCCGGTTGTTCCGACTTGGAACCCGTAGCCGGTGATGCCGACTTTTCTGGGCCTGGAGACGAAAACGTTGCCGGTGGAGTGAAGGGACCGTGGTCCCCGGAGGAGGATGCCGTTCTCAGTCGATTGGTTAGCAAGTTTGGGGCGAGGAATTGGAGCATGATCGCGCGCGGGATACCCGGTCGCTCCGGCAAGTCCTGCCGTCTCCGTTGGTGTAATCAACTTGACCCCGGTGTTAAACGCAAGCCCTTTACTGAAGAAGAAGATCGTGTTATAGTTGCAGCCCATGCAGTACATGGAAACAAATGGGCAGCAATCGCTAGGCTTCTTCCAGGAAGAACAGCTAATGCTATCAAAAATCACTGGAATTCTACACTTAAGCGCAGGTGCTTGGATCTTGGAGGATACATACCGTTGGGCATGGGGGAAGAGGGCAGCCTTGAGGTCCCTGACAAAATAAAGGCATTTTCCGAAGAAACCATGTCAGCAGGGGACATCAATCTATTGAATCCCACGCAAATTAAGAATGTCGGGATGGATAGTGGTATTAATCAGCATGAAGATAATCCTCCAAGAAACGATGATGCTGAAGTGGAGGAACATCCTACCCTGTGTCAACCAGTAGCACGTGTTAGTGCATTTAGTGTCTATAATCCTCCAAGCAGGCCAACAACTGGATCCGCACATTCAAGGATGCTCCCGATGCAGGGGCCTTTGATTCAATCGTCCAAAGTTGAAGTAGGAGCCTGCAAGCTATTTGAGGAAGTTGGCTATGAGCCCATGGTTCCGGTGCAATGTGGTCATCGCTGCTGTTCCGCAATTTCTTGTGAAAGCCATTCTCATGATTCACTACTGGGTCCTGAGTTCATTGACTATTTGGAGCCGCCATCCTTTTCAAGTCATGAATTGATATCTATAGCTACAGATTTGAATAACATTGCTTGGATCAAGAGTGGCTTAGATGCCTTCAAAATGACTTCTTTGAGGCGGGAGCAAGCAAGTTTGTGGGTGTGA 1095 0.5005 MTGGDCAGSASPSPSLAFPNNRAADSEVAGCSDLEPVAGDADFSGPGDENVAGGVKGPWSPEEDAVLSRLVSKFGARNWSMIARGIPGRSGKSCRLRWCNQLDPGVKRKPFTEEEDRVIVAAHAVHGNKWAAIARLLPGRTANAIKNHWNSTLKRRCLDLGGYIPLGMGEEGSLEVPDKIKAFSEETMSAGDINLLNPTQIKNVGMDSGINQHEDNPPRNDDAEVEEHPTLCQPVARVSAFSVYNPPSRPTTGSAHSRMLPMQGPLIQSSKVEVGACKLFEEVGYEPMVPVQCGHRCCSAISCESHSHDSLLGPEFIDYLEPPSFSSHELISIATDLNNIAWIKSGLDAFKMTSLRREQASLWV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0028 364 FunFam MYB transcription factor 56 107 - -
Lele02g0028 364 ProSiteProfiles Myb-like domain profile. 56 102 IPR001005 -
Lele02g0028 364 PANTHER MYB PROTEIN-RELATED 56 221 - -
Lele02g0028 364 MobiDBLite consensus disorder prediction 1 59 - -
Lele02g0028 364 CDD SANT 58 100 IPR001005 -
Lele02g0028 364 MobiDBLite consensus disorder prediction 1 20 - -
Lele02g0028 364 ProSiteProfiles Myb-like domain profile. 103 153 IPR001005 -
Lele02g0028 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 102 IPR017930 -
Lele02g0028 364 Pfam Myb-like DNA-binding domain 56 102 IPR001005 -
Lele02g0028 364 Pfam Myb-like DNA-binding domain 108 152 IPR001005 -
Lele02g0028 364 SUPERFAMILY Homeodomain-like 55 149 IPR009057 -
Lele02g0028 364 Gene3D - 55 107 - -
Lele02g0028 364 Gene3D - 110 156 - -
Lele02g0028 364 CDD SANT 110 153 IPR001005 -
Lele02g0028 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 157 IPR017930 -
Lele02g0028 364 SMART sant 107 155 IPR001005 -
Lele02g0028 364 SMART sant 55 104 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0028 Lele-ChrLele02 191969 197538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0028 51 348 MYB Transcription Factor Family AT3G55730 51.118 8.71e-98 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele02g0028 Myb_DNA-binding 5.2e-14 CL0123