Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0021 ATGTCCCCTAAACCCCCGGGAACCTCTGAATTGGAAGATAGACTGGGTAATTTCAAGCCCTTCTCGGAGTCGGGATCTTGCTCTAGGTCTATTAGCGAGACCGTTGATGGTTCGCATCAATATAAAGGGATATTCTTTGGAAAAAGGGAGGGGCGCTGGCAAGGAACCGATGTGAGAGCTTTGTTCAAGTTGACCTTGGTGGATCAGAGTGAGAAGTGGAATGATAAGGCAGCAGATTTATTCGGAGTTGCTGTTATCAAGCATCAATTTCGTATTAAAAGAAAGCTTCAGAAGTCTTTCATGTTTTTGGGTTACAAAAGATTTTTCAGAAGAACAGTATTGGAAACTTTAGAGTATCTGAAAGATTGCCTTGTAATGCATTGCACTGTTGGTGTGGTCCAAACACGTTTTGAGGGAAGTAGACGGAGTATTATTGTACCACGGTCAGACATGGGTCAAGATTTTAAGGGCTTGTTGGAAACTGGAGTTGGTTGTCTCATACTTTTCAAGGTCAAGAATGAAAGCTTTAAAGCTCATAAGTTGGTACTTGCAGCCTGCCAAATAGTGTTCAAACATGTACACTTCCTCTATAGTTTTGGTCTGCCACCAATTATGTTTGTTTTGGTTTTGAAGGAGACAGTTGGAACTGGAATCGTCCTACCAAGTAATGCTTCTCTTCATTTATACGGATGTGGATTCAGTGCCACTGCCCATGTGCACACGTACTGCCATGATGCAGCATCTCTTGGCTGCTGCTGA 759 0.4282 MSPKPPGTSELEDRLGNFKPFSESGSCSRSISETVDGSHQYKGIFFGKREGRWQGTDVRALFKLTLVDQSEKWNDKAADLFGVAVIKHQFRIKRKLQKSFMFLGYKRFFRRTVLETLEYLKDCLVMHCTVGVVQTRFEGSRRSIIVPRSDMGQDFKGLLETGVGCLILFKVKNESFKAHKLVLAACQIVFKHVHFLYSFGLPPIMFVLVLKETVGTGIVLPSNASLHLYGCGFSATAHVHTYCHDAASLGCC 252
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0021 252 ProSiteProfiles BTB domain profile. 165 191 IPR000210 GO:0005515
Lele02g0021 252 Pfam BTB/POZ domain 156 192 IPR000210 GO:0005515
Lele02g0021 252 SUPERFAMILY TRAF domain-like 38 134 - -
Lele02g0021 252 Gene3D Potassium Channel Kv1.1; Chain A 134 202 IPR011333 -
Lele02g0021 252 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 21 133 IPR008974 GO:0005515
Lele02g0021 252 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 39 194 IPR045005 GO:0016567
Lele02g0021 252 SUPERFAMILY POZ domain 147 195 IPR011333 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele02g0021 Lele-ChrLele02 149050 151649 Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele02g0021 BTB 0.00017 CL0033