Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0018 ATGGCAAGTTCACGTGTTCTTCTTTGCAAGTTGAATGGAGCCGTGCGCGTGAGGAGTTGGTGGAACACCAAGCTGGAAGCCTTTGGCAGCTTTGGAACTATGAACAAGAACCGCTCACTGGGCTAGGGTAGTGAACCGCGACAACGGTTTCTCTGCAGTTTGGTGTGCGATTCTTCTGATCCATCTTTTTCTGGGAAAGTTGGCTCTTTCTCTTTATTTGAGGGCGACTTTATTCTGTTGGATTTCGGGTTCACCTCCATAGATCTGGACCTAACAGAGAATGGATCCAGAGTTAAGAGATCAGAAAAGGTTTTGATACATGCTTATCTAGTCTTTTCGCCGTATTCAAGATTACTTCTTATATTGGGTTTTGTTTTTTCCAATTCATCAAAACATCCCGGAGAGGGGAAGCAATATTTCTCACTATCCACAACTTTCCAAAACATGGCGAATCGGTGGTGGGCTGGAAATATCGTGATGAGACCCACCGACCCCATGTCATCTTCTCCGTCACTCCAGCTAAGAAACCCAGAAGATGACCCAGGCGGATTGAATCATCTCGTGCCTAGACGAGAACAAGAATCCATGGACAAAGCCACCTCAACTAATAGCAGCAACAGCAACACAAATCCAAACGTCCAAAACACCCTAGACGACTATAGCCGCGAAGCCAATGACCATAACCCCGGGAGCCACGAAGCCGTCGAACCCGGCAGCAGTGGCCGCCGACCGAGGGGTCGCCCACCGGGGTCCAAAAACAAGCCGAAGCCCCCTATCGTTGTAACCAAAGAAACCCCAAACGCGCTTCGAAGCCATGTGTTGGAAATTGGAAGCGGCGATGATGTGGTTGAGAGCATCGCCTCCTTCGCGAACCGCCGACACCGAGGGATATCAGTGCTTAGTGGAAGCGGCATTGTGACCGATGTGAAGCTCCGGCAACCGGGGGCACCTGGTGGGGTAATTACGCTTAATGGAAGGTTCGAGATATTGTCATTGTCCGGGGCATTCTTACCGGCGCCTTCACCGCCGGGGGGCACGGGGCTAACGGTGTATTTAGCGGGGGGACAGGGGCAGGTAGTTGGGGGTACGGTGGTGGGTTCTCTGGTGGCTTCGGGGCCAGTGATGGTGATTGCGGCCACATTTGGAAGCGCTACTTATGAGAGGCTACCACTAGAGGAAGAGGCGGGAGGTGAGGCAACGCAGGTGGTGCAGCGGCAATCAAGAAGTACAGGAGCGGCGGCGGCATCACAAGTTCCAATGGTCATGTACAATTTACCTCCAAATGGTGAGATGCCCCACGGCCTGTTTTGGGGCTCACCACCTCGCCCTCCGCCGCCATCTTACTGA 1347 0.5264 MASSRVLLCKLNGAVRVRSWWNTKLEAFGSFGTMNKNRSLGXGSEPRQRFLCSLVCDSSDPSFSGKVGSFSLFEGDFILLDFGFTSIDLDLTENGSRVKRSEKVLIHAYLVFSPYSRLLLILGFVFSNSSKHPGEGKQYFSLSTTFQNMANRWWAGNIVMRPTDPMSSSPSLQLRNPEDDPGGLNHLVPRREQESMDKATSTNSSNSNTNPNVQNTLDDYSREANDHNPGSHEAVEPGSSGRRPRGRPPGSKNKPKPPIVVTKETPNALRSHVLEIGSGDDVVESIASFANRRHRGISVLSGSGIVTDVKLRQPGAPGGVITLNGRFEILSLSGAFLPAPSPPGGTGLTVYLAGGQGQVVGGTVVGSLVASGPVMVIAATFGSATYERLPLEEEAGGEATQVVQRQSRSTGAAAASQVPMVMYNLPPNGEMPHGLFWGSPPRPPPPSY 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0018 448 MobiDBLite consensus disorder prediction 164 261 - -
Lele02g0018 448 Pfam Plants and Prokaryotes Conserved (PCC) domain 270 381 IPR005175 -
Lele02g0018 448 Gene3D - 269 408 - -
Lele02g0018 448 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 202 411 IPR014476 GO:0003680
Lele02g0018 448 FunFam AT-hook motif nuclear-localized protein 269 414 - -
Lele02g0018 448 ProSiteProfiles PPC domain profile profile. 266 404 IPR005175 -
Lele02g0018 448 MobiDBLite consensus disorder prediction 198 219 - -
Lele02g0018 448 CDD DUF296 270 353 IPR005175 -
Lele02g0018 448 SUPERFAMILY AF0104/ALDC/Ptd012-like 267 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0018 Lele-ChrLele02 121800 123531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0018 149 448 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 50.309 7.89e-65 209