Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0007 ATGGGTTGCTGCTTTAGTGCGAGGATCAAAGCTGAGAGCCCTCCTCGCAATGGTTTGACTTCAAACTATGGTAACACAAAAGATGATGGTTTGAGTGGTTTAAGTGACAGGATCTCCACTCCCTCTGTGCCTCCGACTCCCCGGTCAGAGGGTGAGATCTTGAAGTCCTCCAACATAAAGAACTTCAGTTTCAATGAGCTAAGAACTTCTACAAGGAACTTTCGTCCAGATAGTGTGGTGGGTGAAGGTGGATTTGGTTGTGTATTTAAGGGGTGGATTGATGAGCATACACTCGCACCAGTTAAACCAGGGACTGGGCTTGTGATTGCTGTGAAGAGGCTTAACCAAGAGGGCCTTCAGGGACACAATGAATGGCTGACGGAAATAAACTACCTGGGGCAGCTACATCATCCTAATCTGGTGAAACTGATTGGTTACTGCTTAGAGGATGACCACCGGATTTTGGTGTATGAATTTTTGGCTAAGGGCAGTTTGGATAATCACTTGTTTAGGAGGGCTTCTTACTTTCAACCACTTTCTTGGAGCATCCGTATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTGGCATTTCTTCACAGTGACCTAGTAAAAGTGATATATCGAGACTTCAAAACTTCTAACATCTTGATTGATTCGAACTACAATGCAAAGCTCTCTGATTTTGGCTTGGCAAAGGATGGACCAGCAGGTGACAAGAGCCATGTCTCTACAAGAGTAATGGGAACCTACGGCTATGCTGCTCCTGAGTATATGGCCACAGGCCACTTGACTAAAAGGAGTGATGATTCGAGCGACATGGCTACGGTGGGAGGGAGCTCACAAAATCAGACAGTCAAAAGTAGTCATAGCTCAAGCAGCAATGGTCCTAAGCAGCGTAGAAGAGCCATCGATGGATCATCGAATGGAGAAGAGTTGGCACAAGGTATATCATTGACTAAAGTATGCATGAAGAAAGGTGATTGGTGTGCAGTTTTTGATTTTGTAAATGAGGAAAGAAATAAGGGATGCCCTTCATTCAGGTTAAAGTCACTAGGCATGCGTTGTATAGCATTGGCTGAAGATGTTTTAGGTAAAAGGAGGGAACGAAGATAA 1113 0.4474 MGCCFSARIKAESPPRNGLTSNYGNTKDDGLSGLSDRISTPSVPPTPRSEGEILKSSNIKNFSFNELRTSTRNFRPDSVVGEGGFGCVFKGWIDEHTLAPVKPGTGLVIAVKRLNQEGLQGHNEWLTEINYLGQLHHPNLVKLIGYCLEDDHRILVYEFLAKGSLDNHLFRRASYFQPLSWSIRMKVALDAAKGLAFLHSDLVKVIYRDFKTSNILIDSNYNAKLSDFGLAKDGPAGDKSHVSTRVMGTYGYAAPEYMATGHLTKRSDDSSDMATVGGSSQNQTVKSSHSSSSNGPKQRRRAIDGSSNGEELAQGISLTKVCMKKGDWCAVFDFVNEERNKGCPSFRLKSLGMRCIALAEDVLGKRRERR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0007 370 SUPERFAMILY Protein kinase-like (PK-like) 47 268 IPR011009 -
Lele02g0007 370 MobiDBLite consensus disorder prediction 15 51 - -
Lele02g0007 370 ProSiteProfiles Protein kinase domain profile. 74 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g0007 370 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Lele02g0007 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Lele02g0007 370 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Lele02g0007 370 MobiDBLite consensus disorder prediction 13 51 - -
Lele02g0007 370 Pfam Protein tyrosine and serine/threonine kinase 78 268 IPR001245 GO:0004672|GO:0006468
Lele02g0007 370 MobiDBLite consensus disorder prediction 264 309 - -
Lele02g0007 370 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Lele02g0007 370 PANTHER OS01G0588500 PROTEIN-RELATED 46 268 - -
Lele02g0007 370 Gene3D Transferase(Phosphotransferase) domain 1 160 269 - -
Lele02g0007 370 MobiDBLite consensus disorder prediction 270 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0007 Lele-ChrLele02 46364 49422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0007 52 268 Glycoside Hydrolase AT3G07070 51.835 1.78e-74 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele02g0007 PK_Tyr_Ser-Thr 8.8e-34 CL0016