Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0002 ATGGGCTTCTCTTGCGAGTCTTCCAATGCTCCTTCTTCCTATCTAGTTGCAGATCACCATAGTGACTACAAGCTCAAATTTAGGACCATTCTGAGAAAAATGATCTGGGAGCTTGGCTTTGCCTGCGTTGCCCTGCCTCGCCGACGGCCAAGCTTTGTTAAAAACGACCGCGATGGATATAGAAAGATGAATCTAGAGCACAACAAGGCGTGGTTGCTTGCGGAGTCTGGTGGGTGTGGAGCAGAGGTGACGAATGCTGATCCCCAATCTGTTCACTCGTCTTTCCGTTTCAGTTTCTGTTCTCAGGTGGAGCTCGAATCCTCGAGCATGAATTCTTCCGCTGCTGCAACCGTTCTGATGGTTAATCTGGACGATGGAATGAATAATTTTCGAGCTCGCGAGCTGAAATGTCGGAGGATGGAGTCCTTGGAAAAAAGCATATCCCCTGTAGCCAACACTTTGATCAGGTTCAACTTCGGTGAAATTCTATCTGCTACTCGCAATTTCTCCAAAGGTAAAATTGGTCGGTTGTTCTTGCTTAACTTGAATATTATTCCAGGCAGAGTATTGGGGAGAGGGGCCTTGAGTTGTGTATTTAGGGGTAGAGTTGGGCTTTTGAGGACTGCTGTAGCAATCAAACGATTGGACAAGGAAGACAAGGAATCTGCAAAGGCGTTCTGTAGAGAACTGATGATTGCCAGTTCTCTTCATAACCCAAACGTTGTTCCCCTTGTGGGTTTTTGTATGGACCCGGAGGAGGGTTTATTTCTGGTGTACAAATATGTATCCGGGGGCAGCCTAGAGCACCATTTGCATGAAAGGAAGTGTGTGAAGGGTGGTTCAGCACTTCCCTGGTCTGTGAGGTATAAAGTTGCGATTGGAATTGCAGAAGCCGTGTCTTATCTGCATAACGGAACTGAAAGATGCATTGTTCACAGAGACATTAAACCCTCAAACATTCTCCTTTCCTCTAAAAAGACTCCCAAGTTATGCGATTTTGGATTAGCTACGTGGACTTCTGCACCCTCAGTTCCTTTCCTCTGCAAAACAGTCAAGGGAACATTTGGCTATTTGGCTCCTGAATATTTCCAACATGGAAAAGCATCTGATAAGACTGATGTTTATGCTTTTGGAGTTGTTTTATTAGAACTCATAACTGGCCAGAAGCCAATAGAAGCAAAAAAGCCACCAGGAGAGGAGAACTTGGTCTTATGGGCTAAACCCTTGCTACAGAAAGGGAAGGGATCCATTGAAGAGTTGCTGGATCCTCGACTCAAGTGCAGTTTGAGATTCTCAAGTCAGATGGCTCAGATGATAGAAGCAGCAGCTGCTTGTGTTACAAATGAAGAATCTCGGAGACCTGGAATACAAGAGATCATTGCAATACTGAGAGGTCAAGAAGAACGGGTCTTGCCTAAAAGGAAGAAGTGTGGTCTACTTGGGAACGGGTTGGTAGTTGATTGCTACCCTCAACTACAACAAACAAATAACGAGATGAAAAGACCCTTGGCTCTGGCAATGCTTGGAGTTTCAGAGTTTGAGGATGATGATTATCTACATGGCCGTTGA 1569 0.4525 MGFSCESSNAPSSYLVADHHSDYKLKFRTILRKMIWELGFACVALPRRRPSFVKNDRDGYRKMNLEHNKAWLLAESGGCGAEVTNADPQSVHSSFRFSFCSQVELESSSMNSSAAATVLMVNLDDGMNNFRARELKCRRMESLEKSISPVANTLIRFNFGEILSATRNFSKGKIGRLFLLNLNIIPGRVLGRGALSCVFRGRVGLLRTAVAIKRLDKEDKESAKAFCRELMIASSLHNPNVVPLVGFCMDPEEGLFLVYKYVSGGSLEHHLHERKCVKGGSALPWSVRYKVAIGIAEAVSYLHNGTERCIVHRDIKPSNILLSSKKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKASDKTDVYAFGVVLLELITGQKPIEAKKPPGEENLVLWAKPLLQKGKGSIEELLDPRLKCSLRFSSQMAQMIEAAAACVTNEESRRPGIQEIIAILRGQEERVLPKRKKCGLLGNGLVVDCYPQLQQTNNEMKRPLALAMLGVSEFEDDDYLHGR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0002 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Lele02g0002 522 FunFam Putative receptor-like serine/threonine-protein kinase 262 478 - -
Lele02g0002 522 SUPERFAMILY Protein kinase-like (PK-like) 183 468 IPR011009 -
Lele02g0002 522 PANTHER OS08G0249100 PROTEIN 131 475 - -
Lele02g0002 522 SMART serkin_6 184 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g0002 522 ProSiteProfiles Protein kinase domain profile. 184 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g0002 522 Gene3D Transferase(Phosphotransferase) domain 1 262 477 - -
Lele02g0002 522 Pfam Protein kinase domain 188 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g0002 522 Gene3D Phosphorylase Kinase; domain 1 150 261 - -
Lele02g0002 522 FunFam probable serine/threonine-protein kinase PBL7 130 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0002 Lele-ChrLele02 19005 21620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0002 155 507 Trihelix Transcription Factor Family AT1G70460 38.162 8.16e-65 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele02g0002 Pkinase 3.5e-45 CL0016