Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g2000 ATGCATTTTTCGTGCTGGGCACCAGCTGCTGAGCTGTACAAATCCTCATCCACAGTATCAAATGGAATCCTCCTCTCTTCTATAAACTTTCCTTTCAACGCTGCATTCTCATCAACCAAAACACACATAAGCAGGGCATTATATCAATATCGCGTCGCCATGGCCACCTCTGCTATCCAACAATCGGCGTTTGTCGGACAGACTGCTTTGAAGCAGGCAAATGAGCTCGTCCGAAAGGCCCGTGCCTCCGGCAATGGCCGCTTCACCATGCGCCGCACCGTCAAGAGTGCGCCTCAGAGCATCTGGTATGGCCCTGACCGTCCCAAGTACTTGGGTCCCTTCTCCGAACAAATTCCGTCATACCTGACCGGTGAATTCCCCGGCGACTACGGATGGGACACCGCTGGATTATCCGCAGACCCCGAGACCTTTGCCAGGAACCGTGAGCTCGAAGTGATTCACTGCAGATGGGCCATGCTCGGCGCATTGGGATGTGTATTCCCCGAAATCCTCGAGAAGAACGGCGTCAAGTTTGGTGAGGCAGTTTGGTTCAAGGCTGGTGCTCAGATCTTCTCCGAGGGTGGCCTTGATTATCTCGGCAATCCTAACCTCATCCACGCTCAGAGCATCCTCGCCATCTGGGCTTGTCAGGTTGTGCTGATGGGATTCGTTGAAGGGTACAGAGTTGGTGGAGGGCCACTTGGAGAGGGGCTTGACCCAATCTACCCGGGTGGTGCTTTTGACCCGCTGGGTCTGGCTGATGACCCGGATGCGTTTGCAGAGTTGAAGGTGAAGGAAATCAAGAATGGGCGATTGGCAATGTTCTCCATGTTTGGATTCTTCGTTCAGGCCATTGTAACGGGCAAGGGCCCCATTCAGAACCTTTTTGATCATGTTGCCGACCCTGTTGCCAACAATGCTTGGGCTTACGCCACTAACTTCGTCCCTGGACAATGA 957 0.535 MHFSCWAPAAELYKSSSTVSNGILLSSINFPFNAAFSSTKTHISRALYQYRVAMATSAIQQSAFVGQTALKQANELVRKARASGNGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLFDHVADPVANNAWAYATNFVPGQ 318
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele01g2000 318 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 55 317 IPR001344 GO:0009765|GO:0016020
Lele01g2000 318 Gene3D Chlorophyll a/b binding protein domain 109 311 - -
Lele01g2000 318 SUPERFAMILY Chlorophyll a-b binding protein 101 315 - -
Lele01g2000 318 Pfam Chlorophyll A-B binding protein 119 284 IPR022796 -
Lele01g2000 318 FunFam Chlorophyll a-b binding protein, chloroplastic 109 311 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele01g2000 Lele-ChrLele01 24531807 24533795 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g2000 53 318 Chloroplast and Mitochondria Gene Families AT3G27690 87.266 9.03e-179 494