Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1996 ATGCACTATCAGTTGATGCAACAAACTGAAGCCTACTGCTTACCGCAGTATCAAGCCTTAAATCATCAGCTATACGGCAGCGACATTAGAAGCCAAAGAACCACCCACTTCTCTACTCCATGTTCTTCTGATCTCTATTGCACATTGGAGTCCTCCTCTGCAACCGGAACTTTCAATGTTTATAACTCCCCTTCAACTGCAAGTTTCTCGCCTAATGGGAGCCCAATCTCGCAGCAAGATTCTAAATCATTCTCATACCCACCTGATCAACATCATTCTCCTGACAATACTTATAGCTCTCCAATGAGTGGGTCCTACGTAACCGATGATTTGCATAGCAAATTGAAAGAGTTGGAAAGTGTGATGTTTGGCCCTGACTCTGATAATATTGATAGCTATGATAGCACCTTCAAGGACGGAATTAACATTCTTTGGCCTGAAATGGATGGCTGGAGGCAAACAATGGCAGCAATTTCTAGCAAGGACCTGACGCAGGTTCTAGTCACATGTGCAAAAGCAGTTGCGGATAATGATTTGTTAATGGCTCAATGTTTGATGGATGAGTTACGCCAAATGGTGTCGGTTTCTGGTGAACCAATTCAGAGGTTGGGAGCATATATGTTGGAAGGGCTTGTAGCTCGATTCTCTGCCTCTGGGAGTTCAATCTACAAAGCTTTAAGATGCAAAGAACCGGCAAGTGCTGAGCTTCTCTCATATATGCACATACTTTACGAGGTCTGCCCCTACTTCAAATTTGGTTACATGTCTGCAAATGGAGCCATTGCTGAAGCTATTAAATATGAAGACAGAGTTCATATTATTGATTTCCAAATTGCTCAGGGAAGCCAATGGATTACTTTGATTCAGGCTTTTGCTGCTAGACCTGGGGGGCCACCTCACATCCGGATTACAGGTATTGATGATTCGACATCAGCTTATGCCCGTGGAGGAGGACTAAACATAGTGGGAAAGAGACTATCCAAGTTGGCTGAGAAATTCAAGGTGCCATTTGAATTTCATGCTGCAGCTATCTCCGGCTGTGATGTTCAGCTGCATAATCTTGGGGTTCAACGAGGGGAGGCTCTAGCTGTGAATTTTGCGTTCATGCTACATCACATGCCCGATGAAAGTGTCAGCACTGCAAATCACAGGGATAGACTGCTGCGTTTGGTGAAGAGCCTGTCTCCGAAGGTGGTGACACTTGTTGAGCAAGAATCAAACACAAACACAGCACCATTCCTCCCTCGTTTCCTCGAAACTCTGGACTACTACAAAGCTATGTTTGAGTCAATTGACGTGACTCTTTCCAGAGATCACAAAGAGCGAATTAACGTGGAGCAGCATTGCTTGGCGAGAGACCTTGTTAACATCATAGCTTGTGAAGGAGTTGAGAGGGTGGAACGGCATGAGGTGCTGGGCAAGTGGAGGGCCAGATTTGCAATGGCTGGTTTCACACCTTACCCTTTGAGCTCATTGGTGAATAGCACCATCAAGAAACTGCTTGAGAATTATTCTGATAGATATACTCTTCAAGAAAGAGATGGAGCTCTCTATCTTGGTTGGATGAATAGAGATTTAGTTGCTTCTTGTGCGTGGAAGTGA 1602 0.4463 MHYQLMQQTEAYCLPQYQALNHQLYGSDIRSQRTTHFSTPCSSDLYCTLESSSATGTFNVYNSPSTASFSPNGSPISQQDSKSFSYPPDQHHSPDNTYSSPMSGSYVTDDLHSKLKELESVMFGPDSDNIDSYDSTFKDGINILWPEMDGWRQTMAAISSKDLTQVLVTCAKAVADNDLLMAQCLMDELRQMVSVSGEPIQRLGAYMLEGLVARFSASGSSIYKALRCKEPASAELLSYMHILYEVCPYFKFGYMSANGAIAEAIKYEDRVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLNIVGKRLSKLAEKFKVPFEFHAAAISGCDVQLHNLGVQRGEALAVNFAFMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFLPRFLETLDYYKAMFESIDVTLSRDHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRARFAMAGFTPYPLSSLVNSTIKKLLENYSDRYTLQERDGALYLGWMNRDLVASCAWK 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1996 533 Pfam GRAS domain family 163 533 IPR005202 -
Lele01g1996 533 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 120 527 IPR005202 -
Lele01g1996 533 ProSiteProfiles GRAS family profile. 154 533 IPR005202 -
Lele01g1996 533 MobiDBLite consensus disorder prediction 69 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1996 Lele-ChrLele01 24459499 24461100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1996 69 533 GRAS Transcription Factor Family AT5G48150 70.248 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele01g1996 GRAS 8e-137 CL0063