Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1995 ATGGTTTCTTCAGACAAAAGTGCTGATGGCAATGTTTCTTCTGATAAATTTCATCAGAGGCTGAGTTCTCAAAGCGATATTACTGTCTCACAAGAGACTTGTGATGATAAAATTGATTCATCCAACCCAGAGGGAGCAAGAAGAATTCCTTCTGTTGCAGCCGAGAAAGAAGTGCAGGATTCTGATGCTACACCTGATGCACTGCAATCAGATCAAGAAGGAACTGCATGTACCTCACCACTTCAGAGACCTTTGCAGAGTCCTGGTACTGATCAACGTCCATTACAATCTTGTGAGGAAAGTCCCTCTATAATACACGAAAAGAGTTCAAAAGACAGTGGAACTGAAATAGTAGTGTTGGATTCTGATGCTACTGCCAATGCACAGAAATCGGAGCAACTCACATTGTCTTCACTGCATGAGAAACCCTCGCAAAATCCTAGTACCATTCCACGTACTTTGCATTGTGGCCAGGATGGTCCCTCCATAGCTCGTGCAAAAGTCTCAAAGGATGGATATAATTGGCGAAAATATGGCCAGAAAAATGTTAAGGGCAATGAATATATAAGGAGCTATTACAAGTGCACACATCCCAACTGCCCAGCGAAGAAGCAATTGGAACAGTCAAATAATGGACAGATTACAGATACCATTTGCATTGGTCAGCATAATCATCCCCCGGTGAACAGTTCACGACCTGTTGAAGAAAAATCAAACAATCCCCCTCTAGCTGATATGAAAGACAAAACATCCGTTGAACATGGATGTGTGCCTCAACAGATCAAGTCTCTAGAAACTCATCCAGTTTCAACAGTTTCCACAATTAATGAGGTCAAAGCTGCAACTTTACAGTCGATTAGAAGAAGGGATATGGTTCTTGCCAATGATGATCCTGAGTCAAAACGCCTGAAGAAAAACAATAGTAATGCTGATGGCCTTGGGGTTGAGAAGTCAGTTGGTGAATCTCGTCTTGTTGTTCAGACTTCAAGTGAGGTAGATTTTATTAATGATGGGTACCGTTGGCGCAAGTATGGGCAGAAACTAGTAAAAGGAAATCCAAATCCAAGAAGTTATTATCGGTGCTCAAGTCCTGGATGCCCCGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATCAAAAAATTGTGATAACCACCTATGAGGGACATCATGATCATGAAAGCCCCTCTGGAAGGACTGTTAGTCAAAACGGAGCAGCAGATACTTCCACAACAATCATCAACAGCGATTCGGGAAACAAATCTGGGGAAAACTCTGTTTGTATTCATCCAGCAGAACAACAGATTTGCTTGTACTTAGAAAGCAGTTCACAGGAGCAACCAAATGGTGAGCAAATTGCTAAACCAAAGACTTGCGATATGGATGAATCTCAAGGGACTGCTACTCGAGTCTCCAAAAGTACTACAAGTGAGAAAGAACAAAATGGAAACGCGGGTACAGTAAATGATTCAGGCGGGCATAGCACCACATGCCATTCTGGTTCTGAGCCTCCATGTGGATTAAATAAACAGCAGAAAGATGAGGTAAGAACCATATCAGAAGAAAGTAAGTTAAACAAGGAATCTGAACCTGATGCAGAACCTTTCCAAAGCTAA 1614 0.4219 MVSSDKSADGNVSSDKFHQRLSSQSDITVSQETCDDKIDSSNPEGARRIPSVAAEKEVQDSDATPDALQSDQEGTACTSPLQRPLQSPGTDQRPLQSCEESPSIIHEKSSKDSGTEIVVLDSDATANAQKSEQLTLSSLHEKPSQNPSTIPRTLHCGQDGPSIARAKVSKDGYNWRKYGQKNVKGNEYIRSYYKCTHPNCPAKKQLEQSNNGQITDTICIGQHNHPPVNSSRPVEEKSNNPPLADMKDKTSVEHGCVPQQIKSLETHPVSTVSTINEVKAATLQSIRRRDMVLANDDPESKRLKKNNSNADGLGVEKSVGESRLVVQTSSEVDFINDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDQKIVITTYEGHHDHESPSGRTVSQNGAADTSTTIINSDSGNKSGENSVCIHPAEQQICLYLESSSQEQPNGEQIAKPKTCDMDESQGTATRVSKSTTSEKEQNGNAGTVNDSGGHSTTCHSGSEPPCGLNKQQKDEVRTISEESKLNKESEPDAEPFQS 537
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1995 537 MobiDBLite consensus disorder prediction 397 425 - -
Lele01g1995 537 MobiDBLite consensus disorder prediction 442 537 - -
Lele01g1995 537 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 108 413 IPR044810 GO:0003700
Lele01g1995 537 Gene3D WRKY domain 162 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele01g1995 537 SUPERFAMILY WRKY DNA-binding domain 165 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele01g1995 537 ProSiteProfiles WRKY domain profile. 330 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g1995 537 MobiDBLite consensus disorder prediction 136 160 - -
Lele01g1995 537 MobiDBLite consensus disorder prediction 136 155 - -
Lele01g1995 537 Pfam WRKY DNA -binding domain 170 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g1995 537 Pfam WRKY DNA -binding domain 336 393 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g1995 537 FunFam WRKY transcription factor 57 321 395 - -
Lele01g1995 537 MobiDBLite consensus disorder prediction 1 116 - -
Lele01g1995 537 MobiDBLite consensus disorder prediction 63 103 - -
Lele01g1995 537 MobiDBLite consensus disorder prediction 461 506 - -
Lele01g1995 537 SUPERFAMILY WRKY DNA-binding domain 327 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele01g1995 537 Gene3D WRKY domain 322 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele01g1995 537 MobiDBLite consensus disorder prediction 223 247 - -
Lele01g1995 537 MobiDBLite consensus disorder prediction 387 425 - -
Lele01g1995 537 MobiDBLite consensus disorder prediction 223 237 - -
Lele01g1995 537 ProSiteProfiles WRKY domain profile. 164 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g1995 537 MobiDBLite consensus disorder prediction 513 530 - -
Lele01g1995 537 SMART WRKY_cls 335 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g1995 537 SMART WRKY_cls 169 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g1995 537 MobiDBLite consensus disorder prediction 1 36 - -
Lele01g1995 537 FunFam WRKY transcription factor 160 229 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele01g1995 Lele-ChrLele01 24454405 24457417 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1995 128 408 WRKY Transcription Factor Family AT2G04880 49.655 9.30e-81 258
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele01g1995 WRKY 1.9e-25 CL0274