Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1972 ATGCCGGATATGGCGAGCTTACCGACAGGACTGTGGATGCTGAAACCACCACTTCCAGTTGCTCCTCTGTTGCGCTTCAATTCCAGGCAAGTTAGAGATGTCAGCTATCAGCCCCCGGGGACTCAGTTGAGCCTTTTGAAGTCAATTAGTTTTGCACTTCGTGAGAAAAGTTTTGGCCTAATTTTTGGACAGAGTGGAAGTGGAAAAACAACTCTCCTGCAGCTTCTGGCAGGAATAACCAAACCAACCTCTGGTTCCATTTACACCCAAAAATATGATAATGATGGCAAGCCAAGCCAATCTCCCCAGCCATTGGTACCAGAAAGGGTTGGTATTGTCTTCCAGTTTCCTGAGAGGTACTTTGTGGCTGATAATGTGCTTGACGAAGTCACTTTTGGGTGGCCAAGACAAAAGGGTGACTATCAATTGAAGGAACATCTTGCTTTAAGACTTCAGAGGGCAATTAACTGGGTTGGATTTAGTGGGATCTCCTTGGATAAAGATCCTCACGCCCTCAGTGGTGGTTACAAACGTCGCCTAGCCTTGGCAATACAATTGGTTCATATCCCTGACCTGTTGATATTAGATGAGCCTCTTGCTGGTCTTGATTGGAAAGCACGTGCAGATGTTGTGAAGCTTTTGAAGCATCTAAAAAATGAGTTGACTGTACTAGTTGTGAGCCATGATTTAAGAGAGTTCGCAAGTCTAGCTGATCGTTCATGGAGGATGGAAATAGGTGGCAATCTTAGGGAGGAGTCACTACCATTGTGA 771 0.454 MPDMASLPTGLWMLKPPLPVAPLLRFNSRQVRDVSYQPPGTQLSLLKSISFALREKSFGLIFGQSGSGKTTLLQLLAGITKPTSGSIYTQKYDNDGKPSQSPQPLVPERVGIVFQFPERYFVADNVLDEVTFGWPRQKGDYQLKEHLALRLQRAINWVGFSGISLDKDPHALSGGYKRRLALAIQLVHIPDLLILDEPLAGLDWKARADVVKLLKHLKNELTVLVVSHDLREFASLADRSWRMEIGGNLREESLPL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1972 256 Pfam ABC transporter 46 199 IPR003439 GO:0005524
Lele01g1972 256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 244 IPR027417 -
Lele01g1972 256 SMART AAA_5 55 247 IPR003593 -
Lele01g1972 256 Gene3D - 27 255 IPR027417 -
Lele01g1972 256 CDD ABC_cobalt_CbiO_domain1 30 246 IPR015856 GO:0005524|GO:0016020|GO:0055085
Lele01g1972 256 FunFam ABC transporter I family member 11 chloroplastic 24 254 - -
Lele01g1972 256 PANTHER HEAVY METAL TRANSPORTER 30 254 - -
Lele01g1972 256 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 29 256 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1972 Lele-ChrLele01 24164348 24168073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1972 33 230 Calmodulin-binding Proteins AT2G36910 25.490 1.86e-08 53.1