Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1958 ATGTCGTCGGCGTTGGTAGTTCCCGGAGCTCCGGTGTATGCCGACAATCCCACTGGTCTGGCCTCTCGTTCAATCTCCTTCGAACTTTTTCGGTTTCCGCCAATCAGCCAATTCGAACAACATCAAAAGTTTCCACACCACATGGAACAAACCAATGCCATGGATGGTGCTTCTGGGATTTCAAAATCGAATGTACAGAATTCGAATTTCACCTTCAGCACCCCTTCTGCTTCATCTTCGCGCCCGGTTTCGGGTCCTTCTAGGCCGAGATTGGTGAAGGTTCGAAAGCAGAATAATGCTCAGAGTTTGAGGTCGACGACAGGGATCGAGGAGAATCTGCTTGCTCCTGGTTTCAATCCTTTTACTTCTGTCGGCGATAACTTGGTTCGACCCTTTTCTGGGTCGGGAATGGGTTCGTCGTCTATATTTAGTGAAATTGATACTGGACAGACTGGAAATGAGCCATTTGTCTTTGGAGCGAAGAGGGTTGATCCGGTTTCCAATTTAAACAAGAACAACATGGGTTATGGTGTGAATTTCGATCGAGAAATTGCTGATCAAATGAGAAATCTGAAAATGGGCAATGTGAATGATGTTTCAAACATTAAAGATGGGGGTTATAAGGTTGATTATGCATTTCAGAGGGGTCATAAGAAGAGTTCTAGTCATGATGGAAGCTTGGCGTCTACGCTTCCAGAAGATATGAGGAAGTTGAATATTGGTGTTGGTGGAGTTGAAGACATTGACAAGACCAAAATCAGATGTTTAAATGCGTATACAGATGATTTTTCTAAATTTACATCCCGAAGTGTATCCAACCCAGGTGTTCCTTCCAGTGTTGAAACAGAACTCCAAAGTGAGTTGAACAAGAAATTGAGTATTAAAGAAAGCAGTTCTGTTGGTCTACATATTGATAACTCAACAAATGAAGTTCTCAACCAAATGAAGAATCTAAATGTGAATGATTCTTCATGTTTTGCTAGTGTTAAGAAGAATGAAGTTGATGTAACAACTGATAGCCGGAAAAATTCAGCCTCTGCAAGCAGTAAAAGGACAACTAGTTATATTGGGGGAAGAACAGAGGCCAGTCTGTTGAGAAAAATGGAGAAGTTAAAGGTATTCAGTGAAAAGGGGGACTTCACGAGACCAAAATTTTGGAATCCTTCCTATCAGGTACCTGTGGGGGAAATTAACCAAACAGATGCAAGTGGTTGTGGGGCAGACAAAACCAAGGAAGGCATCAGAATGACACAAAATGGCACTTCGTCGTCATCATTCTTATCTGGAGGCATAAACTTTCCCATGGTTGGAAATGCTTCTGGAGTTTCCAAGAGAGATGAATTTGTCTTTACAGGGAAGAAAGATGATTCAAACTCATCTTTTGTTGAGTTCAAAACACCAGGATTAAGGAAGGAACAAAGTAGTAACACAAGAGTGAAGAAAAGTAGAGGTAAACCGAAGCTGTCTACCCCTGTCCAGCTGTTTCATGTACAAGACTTTGTTTCAAAGGAAAATTTTACCGAAGGAAGCCTAGAGGCTTCTGAGGCTTATTCACCAATGGAAGTGTCTCCATATGAGGAAACATTGGCTGAAACTCGGTGCTCAAGGGAGAATTCTGTAACGTCCAATGAGTCCTTGAGTCTTGATACCGACTCTACAGCTACTGATGTTGTGCAGACAACTTCTCATGATCCTATAGATGAAGATCTAATTGTTAAAACTGAAGGCTTACTTATTGATGAATGTGAGGTTACATGCAAGGAAACAAAGGAAAAAGCTTCAGAGTACCACATTCCTAAAAATATTTTCAGTGAGCATTCACAAGAGGGTTTTGCTTCTGGAGGGGAAACTGAAAGCTTTAAGTCAGCAAATGATGAAGTGGACATAATCAGTGATGCAGCTAACGCAGCAGCAGAAGCTGTGAGCAGTCCAAGCTCAAGTGTTGAAGCCTGTAGTGTTGATAGTACTCCTCATCTCAGTCGTGCTTCAAGTTCAAATGATATAAGTGGGTTCCCCTTCACATTTGCTGCCTCTTACTCGGCTGAAGCTCAATCATCTAGTCCTAAGCGCAACCTCAAAAAGAAAAATTGGGTCAAAGTTGGTTATGATGCTCACAGCTCGACTCCAAGCTTGAAGATTTCTTATTCATCACCCTCAATGTCCTTTTCTTCATGCTCCGAAACATCATCTCTTTTCACATCAGGGCAAGCTCAGAAAGAGAAAGTATCAACTCCTCAACCTAAAACGAGGGATTCTGAGATTAATAAGGAGCATGGGATGAAGGAAGAGGCTGCTTCTAATACTGCTGCAAACATTGCTGCTCAGGAAGCTTGCGAAAAGTGGCGACTCAGGGGAAACCAAGCCTATAAAAATGGGGATTTATCTATGGCAGAGGATTGTTACACTAAAGGACTTCAATGTGTTTCTAAAGAAGCAACATCCAGGAGTTCTATGAGAGCTTTGATGCTTTGTTATAGCAATCGTGCTGCCACACGCATGTCTCTTGGAAAGATCAGAGATGCACTAAAAGATTGTATACTGGCAGCTGAAATAGATCCAAATTTCCTCAGGGTACAACTTAGAGCTGCGAATTGTTACCTTGCTCTGGGGGAAGTTGAAGATGCATTGCAATATTTCAAGAGGTGCTTGCAAACAGGAGCTGGTGTTTGTGTAGATCGAAAAATTGCTGTGGAAGCCTCTGATGGCTTACAAAAGGCACAGAAAGTGTCAGAATTCATCAATCATTCTGTTGAACTTTTGCAAAGAAGGACAACCTCTAACACGGATAGGGCATTGGAACAAATTAACGAGGCGTTGATGATAAGTTCATACTCTGAAAAATTACTTGAAATGAAAGCCGAAGCTCTTTTCATGTTGTGTAAATTTGAAGAGGTGATTCAGCTTTGTGACCAGACCCTTGGTTCTGCTGAGAAGAACTTTTGTTCATTGGATGCTGATGGAGAAGTCATAAATTTGGATTACTCAAAAGTCCCAAAATGCTTCTACTTCAGGCTATGGCGATGCTTGATGAAACTTAAATCCCACTTTCACCTCGGAAAGCTTGAAGAAGGTCTTTCTTCACTGGAGGAACAAGAAAAAATTGTGTCTTCCATGAACAAGAGTGGAAGCAATGTTTTCGACTCACTGATTCCCTTGGCTGCGATTGTACGTAAACTATTACATCACAAGACTGCAGGGAATGAAGCATTTCAGGCAGGAAGGCATGCAGAAGCTGTTGAGCATTATACTGCAGCTTTGTCATGTAACGTGGAGTCTCGCCCATTTGCAGCTGTCTGCTTTTGTAATCGTGCTGCTGCTTATACAGCATTAGGTCAAATTACTGATGCTATTGCAGATTGCTGTCTAGCCATAGCTCTGGATGGAAATTATTTGAAGGCACTTTCTAGGCGTGCAACTCTATATGAGATGATCAGAGATTATGCCCAAGCTGCTAGTGATATTCGGAGGCTTGTCTCTATTCTCAATAAACGGGTGGATGATAAGGCCAATCAGCAAGGAATATCTGATAGATCTTATAATTATAATAATGACTTGAAACAAAATTCCATTCGACTTTCTGAAATGGAGGAGGAAGCCAGAAAGGAGATCCCCCTTGATATGTACCTTATATTGGGAATTGAACCGTCTGTTTCTGCATCTGAAATCAAGAAGGCGTATCGGAAGGCTGCACTTAGACATCATCCTGACAAGGCTGGCCAATCTTTGGCGCGAAGTGACAATGGTGATGATCAGATGTGGAAGGATATTGCTGAAGAAGTACGTCGAGATGCTGATAGGCTTTTCAAAATGATTGGAGAGGCCTATGCAGTATTGTCAGACCCTGCCAAGCGAGCACGATACGATGCTGAAGAAGAAATGAGAAATGCTCAAAAGAAGCGCCATGAAGGTAGCGTGGCTAGAACTAATGTTGATACCCAATCTTACCCATTTGAACAAAGCAACAGTAGGAGAAATTGGAGAGATTTACGGAGACCATATGGTAACTCATCTTCTAGAGCCTTTGAAACTGGCCAGTCAGGGAGATCATATGGTAACTCACCTTCTAGAGGCTTTGAAACTGGCCAGTCAGGCTGCTGCTGTTTACTCGCCAGACGTAAGGATCTATATGCACTGAGCAAGATCAATCATGCCTTAGTTCAGCTGCTCGTTGGCTTCATCGTTTTGGGGGGTAAAGAGCTCCCGGGTTCACACACAGATTTGAGATCCCTGGCATAA 4236 0.4235 MSSALVVPGAPVYADNPTGLASRSISFELFRFPPISQFEQHQKFPHHMEQTNAMDGASGISKSNVQNSNFTFSTPSASSSRPVSGPSRPRLVKVRKQNNAQSLRSTTGIEENLLAPGFNPFTSVGDNLVRPFSGSGMGSSSIFSEIDTGQTGNEPFVFGAKRVDPVSNLNKNNMGYGVNFDREIADQMRNLKMGNVNDVSNIKDGGYKVDYAFQRGHKKSSSHDGSLASTLPEDMRKLNIGVGGVEDIDKTKIRCLNAYTDDFSKFTSRSVSNPGVPSSVETELQSELNKKLSIKESSSVGLHIDNSTNEVLNQMKNLNVNDSSCFASVKKNEVDVTTDSRKNSASASSKRTTSYIGGRTEASLLRKMEKLKVFSEKGDFTRPKFWNPSYQVPVGEINQTDASGCGADKTKEGIRMTQNGTSSSSFLSGGINFPMVGNASGVSKRDEFVFTGKKDDSNSSFVEFKTPGLRKEQSSNTRVKKSRGKPKLSTPVQLFHVQDFVSKENFTEGSLEASEAYSPMEVSPYEETLAETRCSRENSVTSNESLSLDTDSTATDVVQTTSHDPIDEDLIVKTEGLLIDECEVTCKETKEKASEYHIPKNIFSEHSQEGFASGGETESFKSANDEVDIISDAANAAAEAVSSPSSSVEACSVDSTPHLSRASSSNDISGFPFTFAASYSAEAQSSSPKRNLKKKNWVKVGYDAHSSTPSLKISYSSPSMSFSSCSETSSLFTSGQAQKEKVSTPQPKTRDSEINKEHGMKEEAASNTAANIAAQEACEKWRLRGNQAYKNGDLSMAEDCYTKGLQCVSKEATSRSSMRALMLCYSNRAATRMSLGKIRDALKDCILAAEIDPNFLRVQLRAANCYLALGEVEDALQYFKRCLQTGAGVCVDRKIAVEASDGLQKAQKVSEFINHSVELLQRRTTSNTDRALEQINEALMISSYSEKLLEMKAEALFMLCKFEEVIQLCDQTLGSAEKNFCSLDADGEVINLDYSKVPKCFYFRLWRCLMKLKSHFHLGKLEEGLSSLEEQEKIVSSMNKSGSNVFDSLIPLAAIVRKLLHHKTAGNEAFQAGRHAEAVEHYTAALSCNVESRPFAAVCFCNRAAAYTALGQITDAIADCCLAIALDGNYLKALSRRATLYEMIRDYAQAASDIRRLVSILNKRVDDKANQQGISDRSYNYNNDLKQNSIRLSEMEEEARKEIPLDMYLILGIEPSVSASEIKKAYRKAALRHHPDKAGQSLARSDNGDDQMWKDIAEEVRRDADRLFKMIGEAYAVLSDPAKRARYDAEEEMRNAQKKRHEGSVARTNVDTQSYPFEQSNSRRNWRDLRRPYGNSSSRAFETGQSGRSYGNSPSRGFETGQSGCCCLLARRKDLYALSKINHALVQLLVGFIVLGGKELPGSHTDLRSLA 1411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1958 1411 Gene3D DnaJ domain 1191 1314 IPR036869 -
Lele01g1958 1411 MobiDBLite consensus disorder prediction 1336 1358 - -
Lele01g1958 1411 MobiDBLite consensus disorder prediction 744 763 - -
Lele01g1958 1411 SUPERFAMILY TPR-like 779 972 IPR011990 GO:0005515
Lele01g1958 1411 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 60 1339 - -
Lele01g1958 1411 PRINTS DnaJ domain signature 1226 1241 IPR001623 -
Lele01g1958 1411 PRINTS DnaJ domain signature 1208 1226 IPR001623 -
Lele01g1958 1411 PRINTS DnaJ domain signature 1263 1283 IPR001623 -
Lele01g1958 1411 SMART dnaj_3 1205 1283 IPR001623 -
Lele01g1958 1411 MobiDBLite consensus disorder prediction 468 488 - -
Lele01g1958 1411 ProSiteProfiles dnaJ domain profile. 1206 1291 IPR001623 -
Lele01g1958 1411 Pfam DnaJ domain 1206 1288 IPR001623 -
Lele01g1958 1411 SUPERFAMILY TPR-like 1062 1162 IPR011990 GO:0005515
Lele01g1958 1411 MobiDBLite consensus disorder prediction 1307 1322 - -
Lele01g1958 1411 Gene3D Tetratricopeptide repeat domain 777 1046 IPR011990 GO:0005515
Lele01g1958 1411 SUPERFAMILY Chaperone J-domain 1161 1287 IPR036869 -
Lele01g1958 1411 MobiDBLite consensus disorder prediction 54 85 - -
Lele01g1958 1411 MobiDBLite consensus disorder prediction 1294 1358 - -
Lele01g1958 1411 Coils Coil 1182 1202 - -
Lele01g1958 1411 CDD DnaJ 1206 1280 IPR001623 -
Lele01g1958 1411 SMART tpr_5 1059 1092 IPR019734 GO:0005515
Lele01g1958 1411 SMART tpr_5 946 979 IPR019734 GO:0005515
Lele01g1958 1411 SMART tpr_5 1097 1130 IPR019734 GO:0005515
Lele01g1958 1411 SMART tpr_5 1131 1164 IPR019734 GO:0005515
Lele01g1958 1411 SMART tpr_5 778 811 IPR019734 GO:0005515
Lele01g1958 1411 SMART tpr_5 856 889 IPR019734 GO:0005515
Lele01g1958 1411 SMART tpr_5 822 855 IPR019734 GO:0005515
Lele01g1958 1411 MobiDBLite consensus disorder prediction 733 766 - -
Lele01g1958 1411 Gene3D Tetratricopeptide repeat domain 1058 1183 IPR011990 GO:0005515
Lele01g1958 1411 MobiDBLite consensus disorder prediction 53 90 - -
Lele01g1958 1411 ProSitePatterns Nt-dnaJ domain signature. 1268 1287 IPR018253 -
Lele01g1958 1411 MobiDBLite consensus disorder prediction 645 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1958 Lele-ChrLele01 23840542 23866033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1958 1208 1289 C2H2 Transcription Factor Family AT1G74250 35.366 4.00e-06 49.3