Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1867 ATGGTGTATTGCCGGTCCGATGCTGCATGCTTATGTTTGTCATGTGATCGAAATGTTCATTCTGCTAATGCCCTTTCGAGACGTCATTCGAGGACCCTAGTATGTGAGAGATGCAATTCACAACCTGCCCATGTAAGGTGTACTGAAGAGAGGATTTCACTATGTCAGAATTGTGATTGGGTGGGCCACAGTGCTTCCACATCTTTGTCAACACATAAGAGGCAAACGATCAATTGCTATTCGGGATGCCCTTCGGCTGCAGAACTTTCTTTGATATGGTCATTTGTCTTGGATATTCCAACTACTGGTGAATCTTCGTGTGAGCAAGAACTTGGTATGATGAGTATTAATGAGAACAGCAACAGGGGTGCTTGGGTTCCCCCCGAAAGTCAGAATGCATCTGGCTCAGTTCATGTAATTGATATACGCGGCATGGATAAGTCTTGTGTCGGGCCATCTTCAATGCCTGAGTCAAGCTCAGAGCCTCGTACAGACCACCCAACTGGACCTGCCAACGAAAGTCTATCCGAGTTATACTGTCCCGGGACAAAAGGTTCTGGACTATATGAAGATGATGATAACATGTATGGTGACTTCGACATGGATGAAATGGACCTGAATCTTGAGAACTATGAGGAACTTTTCGGTGTGGCTCTTAGTCATTCTGAAGAGCTTCTTGAAAATGGTGGGATTGATAGTTTGTTCGGGACAAAGGAAACGTCTGCCAGCGATTCCAATCATCAGGCCGCTGCTGAGGGGTCAATTGGACTGGTCAATACAGCGCATCCGGCATGCAGCAATGCAGCATCTGCAGATTCCATGCTAAGTACGAAGACTGAACCTATTTCCCGTTTTACTGGAAAGCAATCGCAATCAAACCTTTCATTTTCTGGTATTACTGGAGAGAGCAGTGGTGCTGACTATCAAGATTGTGGTGCTTCTTCAATGCTTCTCACGGGGGAGCCTCCGTGGTGCCCTCCATGCCCCGAGAGTTCCATGAAAGCTTCCAACCGCAGTGATGCTGTCATGCGTTACAAAGAAAAGAAGAAGACACGCAAGTTTGAAAAAAGAGTGAGGTATGCTTCTCGCAAGGCAAGGGCTGATGTTCGAAGGCGTGTGAAGGGCCGGTTTGTTAAAGCCGGGGAAGCCTATGATTACGATCCTTTGAGTCAAACCAGAAGCTGCTGA 1188 0.4689 MVYCRSDAACLCLSCDRNVHSANALSRRHSRTLVCERCNSQPAHVRCTEERISLCQNCDWVGHSASTSLSTHKRQTINCYSGCPSAAELSLIWSFVLDIPTTGESSCEQELGMMSINENSNRGAWVPPESQNASGSVHVIDIRGMDKSCVGPSSMPESSSEPRTDHPTGPANESLSELYCPGTKGSGLYEDDDNMYGDFDMDEMDLNLENYEELFGVALSHSEELLENGGIDSLFGTKETSASDSNHQAAAEGSIGLVNTAHPACSNAASADSMLSTKTEPISRFTGKQSQSNLSFSGITGESSGADYQDCGASSMLLTGEPPWCPPCPESSMKASNRSDAVMRYKEKKKTRKFEKRVRYASRKARADVRRRVKGRFVKAGEAYDYDPLSQTRSC 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1867 395 ProSiteProfiles CCT domain profile. 338 380 IPR010402 GO:0005515
Lele01g1867 395 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 383 - -
Lele01g1867 395 CDD Bbox1_BBX-like 34 77 - -
Lele01g1867 395 SMART bboxneu5 1 34 IPR000315 GO:0008270
Lele01g1867 395 SMART bboxneu5 35 77 IPR000315 GO:0008270
Lele01g1867 395 MobiDBLite consensus disorder prediction 148 177 - -
Lele01g1867 395 Pfam CCT motif 338 380 IPR010402 GO:0005515
Lele01g1867 395 ProSiteProfiles Zinc finger B-box type profile. 30 77 IPR000315 GO:0008270
Lele01g1867 395 MobiDBLite consensus disorder prediction 330 362 - -
Lele01g1867 395 MobiDBLite consensus disorder prediction 152 171 - -
Lele01g1867 395 CDD Bbox1_BBX-like 2 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1867 Lele-ChrLele01 21028872 21032986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1867 1 394 C2C2-CO-like Transcription Factor Family AT3G07650 57.002 9.82e-145 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele01g1867 zf-B_box 3.7e-05 No_clan