Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1816 ATGATTCAGGGAGTAGTAGAATCTTTGCAAAGCTTTATCAGACTCAGAAATTTTGAGTTTTCTCCATTGAATAATATGGAAATCTCTAGCACCTATAATGGCGGTGGCATGATGTGGTTTTTTAAGGATAGAGGATTTGATGATAAAAGCATACAAGGAATGTTCAGGAAGTGCAAGTGCCTTGAGGTTGTGCATCAAGAAAGAGCATCTGAGAATTGGACCTATTTGACAAGCATTGGCATTCAAGAGAGGAAACTCTCATCAATTGTTTCAAAATGTCCCAAGATTCTTACCCTTGGCCTTAATGAGAAGATAGTTCCCATGGTTGAATGCCTCAAGACACTGGGAACAAAACCCAATGAAGTTGCTTCTGCTATAGCCAAGTTCCCTCATTTACTCTCACATAGTGTGGAAGAGAAGCTTTGTCCTCTTTTGGCCTTCTTTCAGGCATTGGGCATCCCTGAAAAGCGACTTGGAAAAATAATACTGCTCAATCCAAGGCTTATCAGCTATGGCATTGAAACAAAGCTCACAGAAATTGTAGACTTTCTTGCTAGCCTTGGTCTTAACAAGGATGGAATGATTGGAAAAATTTTAGTGAGGAACCCATATATTATGGGATATAGCGTTGATAAAAGACTCCGCCCTACTACTCAGTTTATGAAGTCAATAGGTCTGACCAATCTCGAACTTCAAGTGGTAGCTGTGAACTTCCCGGAAGTATTGAGTAGAGATGTGAACAGGGTTTTGGAGCCGAATTATGCATACTTAAAGAGATGTGGATTTCAAGACAGACAGATTGTTGCTTTGGTAGTTGGATTTCCTCCAATCCTGTTCAAGAGCATCCAAAATTCTTTAGAACCCAAGATAAGGTTTCTTGTAGATGTGATGGGGAGACAAATCCATGAAGTTATTGATTATCCTGGCTTCTTTCGTCATGGTCTGAAGAGAGACATAGAGTTGCGGCACAAATTTTTAAAGCAGAGGAACTTAGATTGTAGCTTGAGTGAAATGCTTGACTGTAATAAGAAGAAGTTCTTCTTAAAATTTGGTTTATTAGAAGGTCATGTGTTGAGTAATAAGTCTTTGGTCTTTTTTCCTCTTGATCTCTATTTTCTGGTCATTAAAAAGAAACAACAACCAAGTTTTGAAGCTCAAGGCAGAGTTGCTCTAGTTACATGTATCAAAGTAGATCCAGTTGATCTTCTATATTAA 1215 0.3852 MIQGVVESLQSFIRLRNFEFSPLNNMEISSTYNGGGMMWFFKDRGFDDKSIQGMFRKCKCLEVVHQERASENWTYLTSIGIQERKLSSIVSKCPKILTLGLNEKIVPMVECLKTLGTKPNEVASAIAKFPHLLSHSVEEKLCPLLAFFQALGIPEKRLGKIILLNPRLISYGIETKLTEIVDFLASLGLNKDGMIGKILVRNPYIMGYSVDKRLRPTTQFMKSIGLTNLELQVVAVNFPEVLSRDVNRVLEPNYAYLKRCGFQDRQIVALVVGFPPILFKSIQNSLEPKIRFLVDVMGRQIHEVIDYPGFFRHGLKRDIELRHKFLKQRNLDCSLSEMLDCNKKKFFLKFGLLEGHVLSNKSLVFFPLDLYFLVIKKKQQPSFEAQGRVALVTCIKVDPVDLLY 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1816 404 Pfam mTERF 128 346 IPR003690 GO:0003690|GO:0006355
Lele01g1816 404 Pfam mTERF 40 148 IPR003690 GO:0003690|GO:0006355
Lele01g1816 404 PANTHER CGI-12 PROTEIN-RELATED 158 278 IPR003690 GO:0003690|GO:0006355
Lele01g1816 404 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 122 354 - -
Lele01g1816 404 Gene3D Transcription termination factor 3, mitochondrial 130 354 IPR038538 -
Lele01g1816 404 SMART mt_12 232 263 IPR003690 GO:0003690|GO:0006355
Lele01g1816 404 SMART mt_12 301 332 IPR003690 GO:0003690|GO:0006355
Lele01g1816 404 SMART mt_12 159 190 IPR003690 GO:0003690|GO:0006355
Lele01g1816 404 SMART mt_12 87 118 IPR003690 GO:0003690|GO:0006355
Lele01g1816 404 SMART mt_12 196 227 IPR003690 GO:0003690|GO:0006355
Lele01g1816 404 SMART mt_12 268 300 IPR003690 GO:0003690|GO:0006355
Lele01g1816 404 SMART mt_12 123 154 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1816 Lele-ChrLele01 17784638 17789370 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele01g1816 mTERF 1.5e-57 No_clan