Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1772 ATGGCTACACCGGCAAGTGATAACGCTTTTCTAAGACTAAATCATCTTGACATCCATGGTGATGATGCTGATGCTGGATCTCAGGGAGCAGTTGGTAGCAAGAAGAAAAAGAGGGGCCAGCGTGCTGTTGGAGGTGACAAGAGTGGAAGAGGGCTCCGCCAATTTAGTATGAAAGTGTGCGAGAAGGTGGAAAGTAAGGGAAGAACCACTTACAATGAGGTTGCAGATGAACTTGTGGCTGAATTTGCTGACCCAAGCAATAGCATTTCAACTCCTGATCAGCAACAATATGACGAGAAAAACATTCGTCGAAGGGTTTATGATGCTTTGAATGTTCTCATGGCAATGGATATAATTTCCAAGGATAAAAAGGAAATTCAATGGAAGGGTCTCCCTCGTACAAGTCTGAATGATATTGAAGAATTAAAGACGGAGCGCCTTCAGCTTCGGAATCGGATTGAAAAGAAAGCTGCCTACCTGCAGGAGCTGGAGGAGCAATACATAGGTCTTCAGAATCTCATACAACGAAATGAGCAATTATATGGATCTGGAAATGCTCCCAGTGGAGGTGTAGCCTTACCTTTTATTCTTGTGCAGACTCGCCCCCATGCAACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTACATTTTGATTTCAATAGCACTCCTTTTGAGCTGCATGATGACAACTATGTCCTCAAGGCAATGAAATTTTGTGAGAGACCACAGAATGATAATGTGACGCAGAATCTTATGGACGGGGGTGAAGGTTCTAGCATGTCAGGCTTGTATCAGGCGCAGGTCACTCCTTCAGCATCAAACCAACCAGTTAGAAATCTGACCTCGCCGCCTCTCCCTGGAATATTGAAGGCAAGAGTTAAGCATGAGCATTGA 900 0.4422 MATPASDNAFLRLNHLDIHGDDADAGSQGAVGSKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSISTPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKTERLQLRNRIEKKAAYLQELEEQYIGLQNLIQRNEQLYGSGNAPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCERPQNDNVTQNLMDGGEGSSMSGLYQAQVTPSASNQPVRNLTSPPLPGILKARVKHEH 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1772 299 SUPERFAMILY E2F-DP heterodimerization region 136 251 IPR037241 -
Lele01g1772 299 MobiDBLite consensus disorder prediction 269 283 - -
Lele01g1772 299 FunFam Transcription factor-like protein DPB 136 260 - -
Lele01g1772 299 PANTHER TRANSCRIPTION FACTOR DP 3 271 IPR015648 GO:0005667|GO:0051726
Lele01g1772 299 PIRSF Txn_factor_DP 1 299 IPR015648 GO:0005667|GO:0051726
Lele01g1772 299 SMART E2F_TDP_2 47 130 IPR003316 GO:0005667|GO:0006355
Lele01g1772 299 Pfam Transcription factor DP 138 253 IPR014889 -
Lele01g1772 299 Gene3D Transcription factor DP 136 266 IPR038168 -
Lele01g1772 299 Gene3D - 42 135 IPR036388 -
Lele01g1772 299 FunFam Transcription factor-like protein DPB 42 135 - -
Lele01g1772 299 Coils Coil 139 180 - -
Lele01g1772 299 MobiDBLite consensus disorder prediction 23 50 - -
Lele01g1772 299 SMART DP_2 137 297 IPR014889 -
Lele01g1772 299 MobiDBLite consensus disorder prediction 269 299 - -
Lele01g1772 299 Pfam E2F/DP family winged-helix DNA-binding domain 50 130 IPR003316 GO:0005667|GO:0006355
Lele01g1772 299 CDD DP_DD 135 238 IPR014889 -
Lele01g1772 299 SUPERFAMILY "Winged helix" DNA-binding domain 50 131 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1772 Lele-ChrLele01 14846826 14852662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1772 18 246 E2F-DP Transcription Factor Family AT5G02470 51.739 3.31e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Lele01g1772 DP 7.2e-43 No_clan